Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq59048 390 3e-106 >seq59048 Length=3006 Score = 390 bits (432), Expect = 3e-106 Identities = 381/480 (79%), Gaps = 22/480 (5%) Strand=Plus/Plus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGA-TAACATACC 81 || ||| |||||||||||||| |||||| || || ||| | ||||| |||||| Sbjct 1064 AGTGGCAGACGGGTGAGTAACACGTGGG-AATCTACCCATCAGT-ACGGAATAACATTTA 1121 Query 82 GAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCC 141 |||| |||||||||| ||| | | ||| || | | ||| |||| ||| Sbjct 1122 GAAATAAATGCTAATACCGTATATTCT-CTT----CGGAGGAAAGATTTATC---GCT-- 1171 Query 142 GGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGG 201 | | |||| |||||||| |||||| ||||||||| ||||| ||| ||||||| Sbjct 1172 ---GAT---GGATGAGCCCGCGTCAGATTAGGTAGTTGGTAGGGTAATGGCCTACCAAGC 1225 Query 202 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCA 261 | |||||| ||||| | |||||||| ||||| |||||| ||| |||||||||||| ||| Sbjct 1226 CAACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA 1285 Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCA 321 |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| Sbjct 1286 GACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCA 1345 Query 322 ACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTC-TGTCCTCAAGGAAGATAAT 380 | ||| ||| | || ||||||||| |||| ||||||| | | || || |||||||||| Sbjct 1346 ATACCGAGTGGGTGACGAAGGCCTTAGGGTTGTAAAGCCCTTTTCAGCAGGGAAGATAAT 1405 Query 381 GACGGTACTTGA-GGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 |||||||| ||| || ||||||||||||||| |||||||||||||||||||| ||| | Sbjct 1406 GACGGTACCTGACCAAGAAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGA 1465 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||||||||||||| | |||||||||| |||||||||| ||||||||| ||||| ||||| Sbjct 1466 GGGGGCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGAGTGCGTAGGCGGTTTAGTAAGT 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1492861623552