Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq59048 390 3e-106
>seq59048
Length=3006
Score = 390 bits (432), Expect = 3e-106
Identities = 381/480 (79%), Gaps = 22/480 (5%)
Strand=Plus/Plus
Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGA-TAACATACC 81
|| ||| |||||||||||||| |||||| || || ||| | ||||| ||||||
Sbjct 1064 AGTGGCAGACGGGTGAGTAACACGTGGG-AATCTACCCATCAGT-ACGGAATAACATTTA 1121
Query 82 GAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCC 141
|||| |||||||||| ||| | | ||| || | | ||| |||| |||
Sbjct 1122 GAAATAAATGCTAATACCGTATATTCT-CTT----CGGAGGAAAGATTTATC---GCT-- 1171
Query 142 GGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGG 201
| | |||| |||||||| |||||| ||||||||| ||||| ||| |||||||
Sbjct 1172 ---GAT---GGATGAGCCCGCGTCAGATTAGGTAGTTGGTAGGGTAATGGCCTACCAAGC 1225
Query 202 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCA 261
| |||||| ||||| | |||||||| ||||| |||||| ||| |||||||||||| |||
Sbjct 1226 CAACGATCTGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA 1285
Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCA 321
|||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||
Sbjct 1286 GACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCA 1345
Query 322 ACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTC-TGTCCTCAAGGAAGATAAT 380
| ||| ||| | || ||||||||| |||| ||||||| | | || || ||||||||||
Sbjct 1346 ATACCGAGTGGGTGACGAAGGCCTTAGGGTTGTAAAGCCCTTTTCAGCAGGGAAGATAAT 1405
Query 381 GACGGTACTTGA-GGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439
|||||||| ||| || ||||||||||||||| |||||||||||||||||||| ||| |
Sbjct 1406 GACGGTACCTGACCAAGAAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGA 1465
Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499
||||||||||||| | |||||||||| |||||||||| ||||||||| ||||| |||||
Sbjct 1466 GGGGGCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGAGTGCGTAGGCGGTTTAGTAAGT 1524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1492861623552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |