Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq181185 174 3e-41 >seq181185 Length=1060 Score = 174 bits (192), Expect = 3e-41 Identities = 184/240 (77%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||| |||||||||| | ||||||||||||||||| || |||||||| Sbjct 743 AGAGCATTTGGTGAATGCCTTGGCACTAGAAGGCGATGAAGGACGTAATACGTTGCGATA 802 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| || || | ||| |||||| |||||||||||||||| ||||| | Sbjct 803 AGCTTCGGGGAGCT-GCGAATAGGCTTCGATCCGAAGATTTCCGAATGGGGGAACCCACC 861 Query 121 --CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAA 178 ||| | || || ||||||||||| ||| | || ||| | |||||||||| Sbjct 862 TGCCTAGCAGGTATCATATAGTGAATACATAGCTATATGAGGCAAACCCAGCGAACTGAA 921 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 | |||| |||||||| |||||| || ||||||||||| ||| ||||||| |||||||| Sbjct 922 ATATCTCAGTAGCTGGAGGAAAGGACATCAACCGAGACTCCGTTAGTAGTGACGAGCGAA 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915494200768