Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq150668 172 4e-38 seq110960 172 4e-38 seq75644 152 4e-32 seq93010 141 7e-29 >seq150668 Length=1318 Score = 172 bits (190), Expect = 4e-38 Identities = 301/435 (69%), Gaps = 5/435 (1%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || || ||||| || ||| || |||||||| || |||||| | Sbjct 733 GCTTTTGCAGCTGTAGAAGGTGTTTTCTTCTCAGGCAGCTTTGCCGCGATATTTTGGCTT 792 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 || || ||||| ||||||||||| || ||||||||||||||| | ||| || || ||| Sbjct 793 AAAAAGCGTGGTCTTATGCCCGGCCTCACCTTCAGCAATGAGCTTATAAGTCGAGATGAG 852 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATC-TGGTGAATCGTCCGTC 61676 || ||||||| ||||| ||| | ||||| || | |||| | | || | || Sbjct 853 GGACTGCATTGCGATTTCGCTTGCCTCCTATTTAAGCA-TATCATTGCAAAAC---CGGA 908 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 ||| || | | | || | ||||| |||| || || || |||||||| || Sbjct 909 AGAGAAGAGGATCCATTCTATAATGGAGGAGGCAGTAAAAATTGAGCAAGAATTTCTCAC 968 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 ||| |||||||||||| ||||| || |||||||| | || |||| | || || || Sbjct 969 TGATGCTTTGCCCGTCAGTCTCATTGGGATGAATTGCGCTCTTATGTGTCGCTACATAGA 1028 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 ||||| || || ||||| || || | ||| ||| ||| | || | |||| Sbjct 1029 GTTTGTGGCTGATCGTCTTCTGTCTGAACTTGGTTACAAGAAGATTTGGAACTCCGAAAA 1088 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 || |||||||| ||||| | || || ||||| ||||| || |||||||||||||| || Sbjct 1089 TCCGTTTGATTTTATGGAAAATATATCTCTGGAGGGCAAAACCAATTTTTTCGAGAAGCG 1148 Query 61917 TGTAGGCGACTATCA 61931 || ||||| || || Sbjct 1149 CGTTGGCGAATACCA 1163 >seq110960 Length=1818 Score = 172 bits (190), Expect = 4e-38 Identities = 596/926 (64%), Gaps = 49/926 (5%) Strand=Plus/Plus Query 61045 AATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAA 61104 || |||||||| ||||| | || || ||| | ||| |||||| |||| | |||||| Sbjct 319 AACCCTCGTCGGTTCGTGATATTGCCAATCCAATATCCGGATATCTGGCAATTTTACAAA 378 Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164 ||||| | ||||| |||||| | || || ||||| ||||||||||||||||| | Sbjct 379 AAGGCTGTCGCTTCATTCTGGTCAGTTGAAGAGGTTGATTTGTCCAAAGACATTGTGCAA 438 Query 61165 TGGGA-GCGTTTATCGAGC--GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTT 61221 ||||| || ||| ||| || || | |||||| || | || | || ||||| Sbjct 439 TGGGATGCACTTA---AGCCAGGAGAGCGACATTTTATATCGTACGTTCTCGCTTTCTTC 495 Query 61222 GCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAA 61281 || || || || || || || ||| | ||||||| || || || || ||| Sbjct 496 GCTGCCAGTGATGGAATTGTGCTGGAAAATCTGGTGGAACGGTTTAGTCAAGAAGTTCAA 555 Query 61282 GTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAG 61341 || | |||| || || || |||||| | ||||| || || || ||| | || |||||| Sbjct 556 GTACCCGAGGTCCGATGCTTTTACGGCATGCAGATGGCAATAGAAAATATTCATTCGGAG 615 Query 61342 ATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA--------------- 61386 ||||| || |||| || |||||||| ||| | || | | |||| Sbjct 616 ATGTATTGTCTTCTGATTGATACGTATATCCGAGATCCAGTGGAAAAGTATGTATTTTTA 675 Query 61387 ---------------CGTGAACGATTGTTCAATGCCATCGAGACGATAC-CGGCGGTGAA 61430 | || ||||| ||||||||| |||| | || ||| | Sbjct 676 AATCTAAGTTTTCTTAGAGATTTCTTGTTTAATGCCATC---ACGAACCTCGATTGTGTA 732 Query 61431 GCGGAAA--GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAA 61488 ||| ||| | |||||| | | ||||| ||||| | | || |||| || Sbjct 733 CACAAAAAGGCGCAGTGGGCCCTTGACTGGATTGGTGATACAAAGTCAACGTTTGCCGAG 792 Query 61489 CG-ATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAAT 61547 || ||||| || ||||| | |||| || || || || || ||||| | || Sbjct 793 CGTATTGC-AGCCTTTGCTGCAATCGAAGGAGTCTTCTTTTCCGGCAGTTTTGCGTCTAT 851 Query 61548 CTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATC 61607 |||||| | ||||| ||||| || ||||| || |||||||||||||||| | || Sbjct 852 ATTTTGGCTTAAGAAGCGTGGCCTGATGCCAGGCTTGACCTTCAGCAATGAACTTATTAG 911 Query 61608 ACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAA 61667 |||||||| ||| | || || |||||| | || ||||||| || | ||||| Sbjct 912 TCGCGACGAAGGCCTTCACACCGACTTTGCTTGCCTTCTGTTCAAAC---ATATCGTGAA 968 Query 61668 TCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGA 61727 || |||| ||||| || || | ||||| | || ||| ||| Sbjct 969 AAAGCCCGATAAGGAACGTGTTTATGCTATATTCAAGGAGGCATTGGAGATAGAAAAGGC 1028 Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787 || | | ||| || || |||||| ||| || |||||||| |||| | |||| | Sbjct 1029 TTTCTTTAATGAGGCCTTACCCGTCAAACTGATTGGCATGAACTGTGATATGATGTGCCG 1088 Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA-TTTGGGTATGAAGCGGATCTATA 61846 || | |||||||||||||| || || || ||| |||| || | || ||| | | Sbjct 1089 CTACCTCGAATTTGTTGCCGATCGCTTGCTGTACGAGCTTGGTTACG-AGAAGATTTGGA 1147 Query 61847 ATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTT 61906 || | | || || |||||||| ||||| | || ||| | || ||||| ||||| || | Sbjct 1148 ATGCTGAGAATCCCTTTGATTTTATGGAGAATATCTCGATCGAGGGCAAAACGAACTTCT 1207 Query 61907 TCGAGAAACGTGTAGGCGACTATCAA 61932 | ||||| ||||| || || || ||| Sbjct 1208 TTGAGAAGCGTGTTGGGGAATACCAA 1233 >seq75644 Length=2520 Score = 152 bits (168), Expect = 4e-32 Identities = 591/925 (64%), Gaps = 48/925 (5%) Strand=Plus/Minus Query 61045 AATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAA 61104 || |||||||| || || | || || ||| | ||| |||||| |||| | |||||| Sbjct 1499 AACCCTCGTCGGTTTGTGATATTGCCAATCCAATATCCGGATATCTGGCAATTTTACAAA 1440 Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164 ||||| | ||||| |||||| | || || ||||| ||||||||||||||||| | Sbjct 1439 AAGGCTGTTGCTTCATTCTGGTCAGTTGAAGAGGTTGATTTGTCCAAAGACATTGTGCAA 1380 Query 61165 TGGGA-GCGTTTATCGAGC--GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTT 61221 ||||| || ||| ||| || || | |||||| || | || | || ||||| Sbjct 1379 TGGGATGCACTTA---AGCCAGGAGAGCGACATTTTATATCGTACGTTCTCGCTTTCTTC 1323 Query 61222 GCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAA 61281 || || || || || || || ||| | ||||||| || || || || ||| Sbjct 1322 GCTGCCAGTGATGGAATTGTGCTGGAAAATCTGGTGGAACGGTTTAGTCAAGAAGTTCAA 1263 Query 61282 GTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAG 61341 || | |||| || || || |||||| | ||||| || || || ||| | ||||||||| Sbjct 1262 GTACCCGAGGTCCGATGCTTTTACGGCATGCAGATGGCAATAGAAAATATTCACTCGGAG 1203 Query 61342 ATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA--------------- 61386 ||||| || |||| || ||||| || ||| | || | | |||| Sbjct 1202 ATGTATTGTCTTCTGATTGATACATATATCCGAGATCCAGTGGAAAAGTATGTATTTTTA 1143 Query 61387 --------------CGTGAACGATTGTTCAATGCCATCGAGACGATAC-CGGCGGTGAAG 61431 | || ||||| ||||||||| || | | || ||| | Sbjct 1142 AATCTAAGTTTCTTAGAGATTTCTTGTTTAATGCCATC---ACAAACCTCGATTGTGTAC 1086 Query 61432 CGGAAA--GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAAC 61489 ||| ||| | |||||| | | ||||| ||||| | | || |||| || | Sbjct 1085 ACAAAAAGGCGCAGTGGGCCCTTGACTGGATTGGTGATACAAAGTCAACGTTTGCCGAGC 1026 Query 61490 G-ATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 | ||||| || ||||| | |||| || || || || || ||||| | || Sbjct 1025 GTATTGC-AGCCTTTGCTGCAATCGAAGGAGTCTTCTTTTCCGGCAGTTTTGCGTCTATA 967 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 |||||| | ||||| ||||| || ||||| || |||||||||||||||| | || Sbjct 966 TTTTGGCTTAAGAAGCGTGGCCTGATGCCAGGCTTGACCTTCAGCAATGAACTTATTAGT 907 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 |||||||| ||| | || || |||||| | || ||||||| || | ||||| Sbjct 906 CGCGACGAAGGCCTTCACACCGACTTTGCTTGCCTTCTGTTCAAAC---ATATCGTGAAA 850 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 || |||| ||||| || || | ||||| | || ||| ||| Sbjct 849 AAGCCCGATAAGGAACGTGTTTATGCTATATTCAAGGAGGCATTGGAGATAGAAAAGGCT 790 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 || | | ||| || || ||||| ||| || |||||||| |||| | |||| | Sbjct 789 TTCTTTAATGAGGCCTTACCCGTAAAACTGATTGGCATGAACTGTGATATGATGTGCCGT 730 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA-TTTGGGTATGAAGCGGATCTATAA 61847 || | |||||||||||||| || || | ||| |||| || | || ||| | || Sbjct 729 TACCTCGAATTTGTTGCCGATCGCTTGCTATACGAGCTTGGTTACG-AGAAGATTTGGAA 671 Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 | | | || || |||||||| ||||| | || ||| | || ||||| || || || || Sbjct 670 TGCTGAGAATCCCTTTGATTTTATGGAGAATATCTCGATCGAGGGCAAAACAAACTTCTT 611 Query 61908 CGAGAAACGTGTAGGCGACTATCAA 61932 ||||| ||||| || || || ||| Sbjct 610 TGAGAAGCGTGTTGGGGAATACCAA 586 >seq93010 Length=2134 Score = 141 bits (156), Expect = 7e-29 Identities = 568/886 (64%), Gaps = 40/886 (5%) Strand=Plus/Minus Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 ||| || ||||| || ||||| || || || |||| |||||||| | |||||| ||||| Sbjct 1093 AGAGGCTAGGTTACAAACAGCAATTTCATCGGGAGATGTATACTCAAGAATTTCAGTGCA 1034 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 | ||| ||||| | || || | | ||| ||||| || |||||||| | ||| Sbjct 1033 TAAATTGCTGCATTTAAGAGTACCAAGGTGCTGGTGATTCGATTTACGATTGCAGGAATC 974 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCC---- 66188 ||||| | |||| | ||| | || || || | ||| | ||||| ||||| | || Sbjct 973 TTTGTAGAGCATGAATGGATTCCCAGTTTCTATTTGTGCTTCAATAATGGCATACCTGCA 914 Query 66189 --AAAGAG-CG-----------CGTGCCTTCA----CCGTA------CGTACCGCCCTAC 66224 ||| || || | | |||| ||| | ||| ||| | | Sbjct 913 ATAAAAAGACGACAACAACTTACCAGACTTCCTGAGCCGGAAGAGTTCGTCTCGCTTTGC 854 Query 66225 CTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284 | | | ||| || |||||| || || || |||||||| | || || || | Sbjct 853 CCTCCCTTTCATACCTTTCGTAAAGTGAATCAAATTGATCACCCCACAAATCAGAAAGGC 794 Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344 ||||| | ||| ||| ||| || ||| || |||| || ||||| ||||||| Sbjct 793 CAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATAA 734 Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-G 66403 | ||||| || ||||| ||||| || || ||||| | || || ||| || || | Sbjct 733 ACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCAG 674 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || ||||| || || | ||| | ||||| | ||||||||| || || |||||| Sbjct 673 TG-TTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATG 615 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 || || | || | || ||||| || |||||||||||||| |||||| || Sbjct 614 GCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAA 555 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCT 66583 ||||| ||||| || || || || || || | ||||| || || | || || | | Sbjct 554 ACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGG-TACC 496 Query 66584 CGTGCC-CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGC 66642 ||||| ||||| |||||||| | ||||||||| || || | || || || || Sbjct 495 AGTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGC 436 Query 66643 ACAAT--CGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGG 66700 ||| | ||| | ||| | ||||| |||||| |||| |||| || || | || Sbjct 435 ACATTGCCGG--AGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGA 378 Query 66701 TAGCA--TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGT 66758 | || || || | ||||| | ||||| | | ||||| ||||| | ||||| Sbjct 377 AAACAGCTGGAC--ATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGT 320 Query 66759 GCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGC 66818 | ||||| | | ||||| | ||||| || || ||| || || |||| || Sbjct 319 GAGTAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAA 260 Query 66819 CATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 ||||| || | || || |||||| | | ||||| ||||| Sbjct 259 AGTGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTC 214 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 65704 AAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG 65763 ||||| ||| |||| || || || |||||||||||| |||| || ||| | ||| || Sbjct 1439 AAGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAG 1380 Query 65764 TTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACC 65823 ||| | |||||| ||| || | || | || ||| | | ||| | || || | || Sbjct 1379 TTCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCC 1320 Query 65824 TTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCT 65873 |||||| || |||||||| || || ||||||| ||| ||||||| |||| Sbjct 1319 TTGAACACCTATACCGATTGGTCGGTGACGCATATTCGAACGTCGAGCCT 1270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396034937786720