Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09-
25] 56,778 sequences; 539,424,504 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq6823 75.2 1e-11
seq3635 75.2 1e-11
>seq6823
Length=23986
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/104 (77%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
|||||||| |||||| || | ||||||||| |||||||||||| || | ||| ||||
Sbjct 7 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCG 65
Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
| ||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 66 ACATCGGCCTGGTTTGAGCACTCAAATTTGTTCAAAGTAAACGT 109
>seq3635
Length=37909
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/104 (77%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
|||||||| |||||| || | ||||||||| |||||||||||| || | ||| ||||
Sbjct 37249 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCG 37307
Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
| ||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 37308 ACATCGGCCTGGTTTGAGCACTCAAATTTGTTCAAAGTAAACGT 37351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594872618052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |