Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09-
25] 56,778 sequences; 539,424,504 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3635 89.7 5e-16
seq6823 78.8 1e-12
seq6494 73.4 4e-11
>seq3635
Length=37909
Score = 89.7 bits (98), Expect = 5e-16
Identities = 129/179 (72%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTAC 66
|| ||||||||||| ||||| ||| | ||||| |||||| | || ||| | ||
Sbjct 37351 ACGTTTACTTTGAACAAATTTGAGTGCTCAAACCAGGCCGATGTCGCCTGAAAAGTTTTG 37292
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126
||||||||||| ||||||||| | ||||||||||| || ||||| | ||| | ||||
Sbjct 37291 CATGGAATAATGGAATAGGAC-TTCGGTTCTATTTCGTTGGTTT-TCGGATCCGAAGTAA 37234
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|||| || | || || ||||| || |||| | | ||||||||||| ||||
Sbjct 37233 TGATCAAAAGAGACAGGCGGGGACGTTTGTATGGTTGCGCTAGAGGTGAAATTCATGGA 37175
>seq6823
Length=23986
Score = 78.8 bits (86), Expect = 1e-12
Identities = 81/104 (78%), Gaps = 4/104 (4%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTAC 66
|| ||||||||||| ||||| ||| | ||||| |||||| | || ||| | ||
Sbjct 109 ACGTTTACTTTGAACAAATTTGAGTGCTCAAACCAGGCCGATGTCGCCTGAAAAGTTTTG 50
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
||||||||||| ||||||||| | ||||||||||| || |||||
Sbjct 49 CATGGAATAATGGAATAGGAC-TTCGGTTCTATTTCGTTGGTTT 7
>seq6494
Length=25048
Score = 73.4 bits (80), Expect = 4e-11
Identities = 105/145 (72%), Gaps = 6/145 (4%)
Strand=Plus/Plus
Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACAT 63
|| || |||||||| || ||||| ||| | ||||| |||||| || | ||| |
Sbjct 24254 AGCACGTTTACTTTTAACAAATTTGAGTGCTCAAACCAGGCCGATGTTACCTGAAACGTT 24313
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
| ||| ||||||| ||||||||| | |||||||||||||| ||||| | || | |
Sbjct 24314 TTGCATAGAATAATTGAATAGGACTT-CGGTTCTATTTTGTTGGTTTTT--GATCCGAAG 24370
Query 124 TAATGATAAATACGGATAGTCGGGG 148
||||||| || | || || |||||
Sbjct 24371 TAATGATCAAGAGAGACAGGCGGGG 24395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511718381120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |