Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09-
25] 56,778 sequences; 539,424,504 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq33564 188 1e-45
seq1714 156 8e-36
seq53422 147 4e-33
seq28945 132 9e-29
seq25503 132 9e-29
seq11991 132 9e-29
seq19647 131 3e-28
seq12450 131 3e-28
seq17661 125 1e-26
seq13778 125 1e-26
seq11172 125 1e-26
seq9102 125 1e-26
seq20233 116 7e-24
seq7445 114 2e-23
seq26061 113 9e-23
seq13735 111 3e-22
seq27411 107 4e-21
seq24567 105 1e-20
seq7813 105 1e-20
seq24943 104 4e-20
seq6452 89.7 1e-15
seq21262 86.0 1e-14
seq23355 73.4 7e-11
seq12250 73.4 7e-11
>seq33564
Length=1329
Score = 188 bits (208), Expect = 1e-45
Identities = 176/221 (80%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |
Sbjct 1111 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACAAT 1053
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | |||||||||| | | | || | ||| |||| |||| || || || || | |
Sbjct 1052 GACGGTGCCAACGAGTCTGACCTTCTGGCCCGAAAGGGTTGGGCAAACTGGTCAATCACC 993
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||| || ||||| | | ||| |||| || | | | |||||||||| ||||||||| |
Sbjct 992 GTCATGACAGGGATCGGGGCTTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTG 933
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| |||||||||||||||||||||||
Sbjct 932 CAAGTCATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 892
>seq1714
Length=55938
Score = 156 bits (172), Expect = 8e-36
Identities = 169/220 (77%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||||||||||||||||| |||||||||| | | |||| |||||||| ||||| |
Sbjct 19887 TTGAG-CAATAACAGGTCTGTGAAGCCCTTAGATCTCCGGGGCTGCACGCGCCCTACAAT 19945
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| ||||||| || | ||| || | ||| |||| ||||||| || || || | |
Sbjct 19946 GACGCTGCCAACGTGTCTGATCTTCTGGTCCGAAAGGGTTGGGTAAACTGGTCAATCACC 20005
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATT-ATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286
||| || ||||||| | | | | |||| || | | | |||||||||| || ||||||
Sbjct 20006 GTCATGATGGGGATCGGGTCTAGGAATTGTTTTCCCGTGAACGAGGAATTCCCAGTAAGT 20065
Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326
| ||| || ||| |||||||| ||||||||||||||||
Sbjct 20066 ACATGTAATAAGCTTGCGTTGATAACGTCCCTGCCCTTTG 20105
>seq53422
Length=546
Score = 147 bits (162), Expect = 4e-33
Identities = 167/221 (76%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| |||||||||||||||||||||| ||||| | | ||||||||||||||||||| |
Sbjct 513 TTGAG-CAATAACAGGTCTGTGATGCCCATAGATCTCCGGGGCCGCACGCGCGCTACAAT 455
Query 169 GACAGAGCCAACGAGTTCATCACCTT---GGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||| | |||| |||| | ||||| | ||| |||| |||| || || || || |
Sbjct 454 GACGGTACCAAAGAGT--CTGACCTTTTGGCCCGAAAGGGTTGGGCAAACTGGTCAATCG 397
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| || || ||||| | | ||| |||| || | | | |||||||||| ||||||| |
Sbjct 396 CCATCATGACAGGGATCGGGGCTTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTATG 337
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326
|| || || ||| ||| |||||||||||||| ||||||
Sbjct 336 TGCAAGTAATAAGCTTGCGCTGATTACGTCCCTGTCCTTTG 296
>seq28945
Length=1958
Score = 132 bits (146), Expect = 9e-29
Identities = 162/218 (74%), Gaps = 5/218 (2%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
|||| ||||||||||||||||||||||||| | | |||||||| ||||||| |||| |
Sbjct 554 GCAACCACAGGTCTGTGATGCCCTTAGATGTCCGGAGCCGCACGAACGCTACAATGACGG 613
Query 174 AGCCAACGAGTTCATCACCTT---GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC 230
|||||||| ||| | ||||| | ||| |||| |||| || || || || | |||
Sbjct 614 TGCCAACGA-TTC-TGACCTTCTGGACCGAAAGGATTGGGCAAACTGGTCAATCAACGTC 671
Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290
|| ||||| | | ||| |||| || | | | |||||||||| ||| || || ||
Sbjct 672 ATGACAGGGATCGGGGCTTGTAATTGTTCCCCGTGAACGAGGAATTCCTTGTTAGTGCAA 731
Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||| ||| | ||||||||| ||| |||||||
Sbjct 732 TTCATAAGCTTGCGCTCATTACGTCCTTGCTCTTTGTA 769
Score = 78.8 bits (86), Expect = 2e-12
Identities = 95/128 (74%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
|||| |||| || || || || | | ||| || | ||| | | ||| |||| | |
Sbjct 810 AAGGGTTGGGCAAACTGGTCAATCACCGTCATGACAGAGATCGGGGCTTGGAATTGGTCC 869
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
|| |||||||||| ||||||||| || ||||| ||| ||| |||||||||||||||
Sbjct 870 CCTG-AACGAGGAATTCCTAGTAAGTGCAAGTCATAAGCTTGCGCTGATTACGTCCCTGC 928
Query 321 CCTTTGTA 328
||||||||
Sbjct 929 CCTTTGTA 936
>seq25503
Length=3017
Score = 132 bits (146), Expect = 9e-29
Identities = 163/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||| || ||||||||||||||| |||||| | |||||||||||||||| |
Sbjct 644 TTGAG-CAAACACCGGTCTGTGATGCCCTAAGATGTCCGTAACCGCACGCGCGCTACAAT 586
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
| | |||||||||| | | | || | ||| |||| |||| || || || || | |
Sbjct 585 ATCGGTGCCAACGAGTCTGAACTTCTGGCCCGAAAGGGTTGGGAAAACTGGTCAATCACC 526
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||| || ||||| | | ||| |||| || ||| | |||||||||| |||||||| |
Sbjct 525 GTCATGACAGGGATCGGGGCTTGGAATTGTTCCTCGTGAACGAGGAATTTCTAGTAAGTG 466
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327
| |||| ||| | | |||| |||||||||||||||||
Sbjct 465 CAAATCATAAGCTTGTGCTGATAACGTCCCTGCCCTTTGT 426
>seq11991
Length=12637
Score = 132 bits (146), Expect = 9e-29
Identities = 160/215 (74%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
||| || ||||||||||||||||||||||| |||| ||| |||||||||| |||| |
Sbjct 7768 CAAGAAGAGGTCTGTGATGCCCTTAGATGTCTGGGGCTGCATGCGCGCTACAATGACGGT 7709
Query 175 GCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||||||||| | | || | ||| |||| ||| || || || || | | ||| ||
Sbjct 7708 GCCAACGAGTCTGGCCTTCTGGTCCGAAAGGGTTGGCAAA-CTGGTCAATCGCCGTCATG 7650
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
||||| | | ||| |||| || | | | |||||||||| | ||||| | | |||
Sbjct 7649 ACAGGGATCGGGGCTTGGAATTGTTTCCCGTGAACGAGGAATTCATAGTATGTACAAGTC 7590
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||| ||| |||||||||||||||||||||||
Sbjct 7589 AAGAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 7555
>seq19647
Length=5558
Score = 131 bits (144), Expect = 3e-28
Identities = 163/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||| || |||| |||||||||||||||||| | | ||| | |||||||||| |
Sbjct 2534 TTGAG-CAAAAATAGGTTTGTGATGCCCTTAGATGTCCGGAACCGTATGCGCGCTACAAT 2592
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | |||||||||| | | || || | ||| ||| | |||| || ||||| || | |
Sbjct 2593 GACGGTGCCAACGAGTCTGACCATCTGGCCCGAAAGTTATGGGCAAACTTGTCAATCACC 2652
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||| || | ||| | | ||| ||| | | | | |||||||||| |||| | || |
Sbjct 2653 GTCATGACAGTGATCGGGGCTTGAAATATTCCCCCGTGAACGAGGAATACCTAATTAGTG 2712
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| | |||||| ||||||||||||||||
Sbjct 2713 CAAGTCATAAGCTTTCACTGATTAAGTCCCTGCCCTTTGTA 2753
>seq12450
Length=11984
Score = 131 bits (144), Expect = 3e-28
Identities = 166/224 (74%), Gaps = 7/224 (3%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||||||||||||||||||||||| | |||| | ||||| |||||| ||| || |
Sbjct 8280 TTGAG-CAATAACAGGTCTGTGATGCCCTGAAATGTACAGGGCCACACGCGTGCTTCAAT 8222
Query 169 GACAGAGCCAACGAGTTCATCACCTT---GGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||| ||||||||||| | ||||| | ||| |||| | ||||| || ||||| |
Sbjct 8221 GACGCTGCCAACGAGTT--TGACCTTCTGGCCCGAAAGGGTTAGGTAAACTGGTTAATCA 8164
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATT-GCTCTTCAACGAGGAATGCCTAGTAA 284
||| || ||||| | | | |||| || | | | ||| ||||| ||||| ||
Sbjct 8163 ACGTCATGGCAGGGATCGGGGCTATGAATTGTTCTCCCGTGGACGTGGAATTCCTAGAAA 8104
Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | |||||| || ||| |||||||||||||||||||||||
Sbjct 8103 GTACATGTCATAAGTTTGCGCTGATTACGTCCCTGCCCTTTGTA 8060
>seq17661
Length=6812
Score = 125 bits (138), Expect = 1e-26
Identities = 162/221 (73%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||| || ||||||||||||||||||||||| |||| || ||||||||||| |
Sbjct 1539 TTGAG-CAAGAAGAGGTCTGTGATGCCCTTAGATGTCTGGGGCTGCGCGCGCGCTACAAT 1481
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
| | |||||||||| | | || | ||| |||| | || || || || || | |
Sbjct 1480 GCTGGTGCCAACGAGTCTGGCCTTCTGGTCCGAAAGGGTTTGGCAAACTGGTCAATCACC 1421
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||| || ||||| | ||| |||| || | | | |||||||||| | ||||| | |
Sbjct 1420 GTCATGACAGGGATCCGGGCTTGGAATTGTTCCCCGTGAACGAGGAATTCATAGTATGGG 1361
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| || |||||||||||| |||||||
Sbjct 1360 CAAGTCATTAGCTTGCGCTGGTTACGTCCCTGCTCTTTGTA 1320
Score = 113 bits (124), Expect = 9e-23
Identities = 157/216 (73%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTG-GGCCGCACGCGCGCTACACTGACAG 173
||| || ||||||||||||| ||||||| ||||| ||| |||||||||| ||| |||| |
Sbjct 3825 CAAGAAGAGGTCTGTGATGCACTTAGAT-TTCTGCGGCTGCACGCGCGCAACAATGACGG 3767
Query 174 AGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232
| |||||||| | | || | || |||| || | || || || || | | |||
Sbjct 3766 TGGCAACGAGTCTGGCCTTCTGGTCCAAAAGGGTTGAGCAAACTGGTCAATCACCGTCAA 3707
Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
| | ||||| | | ||| |||| || | | | |||||||||| | ||||| | || ||
Sbjct 3706 GATAGGGATCGGGGCTTGAAATTGTTCCCCGTGAACGAGGAATTCATAGTATGTGCAAGT 3647
Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| ||| || |||| |||||| |||||| ||||
Sbjct 3646 CATGAGCTTGCACTGATAACGTCCTTGCCCTATGTA 3611
>seq13778
Length=10297
Score = 125 bits (138), Expect = 1e-26
Identities = 189/262 (72%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | || | || | | ||| || ||| ||||||||||||||||
Sbjct 6459 CTTCTTAGAGGGACAAGCGTAACGAATGTGCTCGAAATT-GAG-CAATAACAGGTCTGTG 6516
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| |||||||| ||||| ||||||| | || |||| ||||||||||| | |
Sbjct 6517 ATGCCCTGAGATGTTCAGGGCCACACGCGCAATTCAATGACGCTGCCAACGAGTT--TGA 6574
Query 191 CCTT---GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247
|||| | ||| |||| ||||||| || ||||| | ||| || ||||| | |
Sbjct 6575 CCTTCTGGCCCGAAAGGGTTGGGTAAACTGGTTAATCAACGTCATGGCAGGGATCGGGGC 6634
Query 248 TTGCAATTATT-GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
| |||| || | | | ||| ||||| ||||| || | |||||| | ||| |
Sbjct 6635 TATGAATTGTTCTCCCATGTACGTGGAATTCCTAGAAATTTCATGTCATAGGTTTGCGCT 6694
Query 307 GATTACGTCCCTGCCCTTTGTA 328
|||||| |||||||||||| ||
Sbjct 6695 GATTACATCCCTGCCCTTTTTA 6716
>seq11172
Length=13853
Score = 125 bits (138), Expect = 1e-26
Identities = 162/221 (73%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||| || ||||||||| ||||||||||||| |||| ||| |||||||| |
Sbjct 2515 TTGAG-CAAGAAGAGGTCTGTGCTGCCCTTAGATGTATGGGGCTGCAAACGCGCTACTAT 2457
Query 169 GACAGAGCCAACGAGTTCATCACCTTGGC-CGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | |||||||||| || |||| || |||| |||| || || || || | |
Sbjct 2456 GACGGTGCCAACGAGTCTGTCCTTTTGGTTCGAAAGGGTTGGGCAAACTGGTCAATCACC 2397
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
| | || ||||| || ||| |||| || | | |||||||||| | ||||| | |
Sbjct 2396 GCCATGACAGGGATCGAAGCTTGGAATTGTTCGCCGTGAACGAGGAATTCATAGTATGTG 2337
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| |||||||||| ||||||||||||
Sbjct 2336 CAAGTCATGAGCTTGCGCTGATTACGTCTCTGCCCTTTGTA 2296
>seq9102
Length=17868
Score = 125 bits (138), Expect = 1e-26
Identities = 161/217 (74%), Gaps = 5/217 (2%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||| |||||||||||||||||| || || ||||| ||||| |||| | |||
Sbjct 13987 CAATAAGAGGTCTGTGATGCCCTTAAATTGTCGGGGCCACACGCAAGCTATAATGATGAT 13928
Query 175 GCCAACGAGTTCATCACCT--TGGC-CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231
|||||||| ||| | || | |||| || |||| |||| || || ||||| | | |||
Sbjct 13927 GCCAACGA-TTC-TGACGTTCTGGCTCGAAAGGGTTGGGCAAACTGGTTAATCGCCGTCA 13870
Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291
|| ||||| || ||| |||| || | | | |||||||||| ||||||||| || |
Sbjct 13869 TGACAGGGATCAAGGCTTGGAATTGTTTCCCGTGAACGAGGAATTCCTAGTAAGTGCAAG 13810
Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| ||| || |||||||||| ||||| ||||||
Sbjct 13809 GCATAAGCTTGCACTGATTACGTCTCTGCCTTTTGTA 13773
>seq20233
Length=5247
Score = 116 bits (128), Expect = 7e-24
Identities = 160/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||| || ||||||||| ||||||||||||| |||| || ||||||||||| |
Sbjct 1873 TTGAG-CAAGAATAGGTCTGTGGTGCCCTTAGATGTCTGGGGCTGCGCGCGCGCTACAAT 1815
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
|| | |||||||||| | | || | ||| ||| | || || || || || | |
Sbjct 1814 GATGGTGCCAACGAGTCTGGCCTTCTGGTCCGAAAGTGTTTGGCAAACTGGTCAATCACC 1755
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||| || ||||| | ||| |||| || | | | |||||||||| | ||||| | |
Sbjct 1754 GTCATGACAGGGATCCGGGCTTGGAATTTTTCCCCGTGAACGAGGAATTCATAGTATGGG 1695
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| || |||||||||||| ||||||
Sbjct 1694 CAAGTCATTAGCTTGCGCTGGTTACGTCCCTGCATTTTGTA 1654
>seq7445
Length=22135
Score = 114 bits (126), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||||||||||||| ||||||||| |||||| | ||||| |||||||||| || |
Sbjct 17009 TTGAG-CAATAACAGGTCTTTGATGCCCTGAGATGTCCAGGGCCACACGCGCGCTTCAAT 17067
Query 169 GACAGAGCCAACGAG-TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| ||||||||| || | | || | ||| |||| ||||||| | ||||| |
Sbjct 17068 GACGCTGCCAACGAGTTTGACCGTCTGGCCCGAAAGGGTTGGGTAAACCGGTTAATCAAC 17127
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATT-GCTCTTCAACGAGGAATGCCTAGTAAGC 286
| | || ||||| | | | |||| || | | | ||| ||||| ||||| ||
Sbjct 17128 GCCATGGCAGGGATCGGGGCTATGAATTGTTCTCCCGTGTACGTGGAATTCCTAGAAATT 17187
Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| |||||| | ||| ||||||||||||||||||||||
Sbjct 17188 TCATGTCATAGGTTTGCGCGGATTACGTCCCTGCCCTTTGTA 17229
>seq26061
Length=2792
Score = 113 bits (124), Expect = 9e-23
Identities = 107/134 (80%), Gaps = 2/134 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |
Sbjct 691 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACAAT 633
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | |||||||||| | | | || | ||| |||| |||| || || || || | |
Sbjct 632 GACGGTGCCAACGAGTCTGACCTTCTGGCCCGAAAGGGTTGGGCAAACTGGTCAATCACC 573
Query 228 GTCGTGCTGGGGAT 241
||| || |||||
Sbjct 572 GTCATGACAGGGAT 559
>seq13735
Length=10336
Score = 111 bits (122), Expect = 3e-22
Identities = 157/216 (73%), Gaps = 5/216 (2%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||| |||||| |||||||||| || ||| ||||| ||||| ||| | ||||
Sbjct 8216 CAATAA--GGTCTGAGATGCCCTTAAATTTTCGGGGCCACACGCAAGCTCTAATGACGAT 8159
Query 175 GCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||||||| | | ||| || | ||| |||| |||| || || || || | | || ||
Sbjct 8158 GCCAACGAATCTGATCTTCTGGACCGAAAGGGTTGGGCAAACTGGTCAATCACCGTAATG 8099
Query 234 CTGGGGATAG-AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
||||| | ||| ||| |||| || | | | |||||||||| ||||||||| || |
Sbjct 8098 ACAGGGATCGGAGC-TTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTGCAAGG 8040
Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| | || ||||||||| |||||||||||||
Sbjct 8039 CATAATTTTGCACTGATTACGTTCCTGCCCTTTGTA 8004
>seq27411
Length=2336
Score = 107 bits (118), Expect = 4e-21
Identities = 158/218 (72%), Gaps = 7/218 (3%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
||||| ||| |||||||||||||| ||||| |||| ||||| |||| | ||| |
Sbjct 1933 CAATATGAGGCCTGTGATGCCCTTAAATGTTACTGGCCACACGCAAGCTAAAATGAGAAT 1874
Query 175 GCCAACGAGTTCATCACCTT--GGC-CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231
||||| |||| | ||||| ||| || ||| ||| || || | || | | |||
Sbjct 1873 GCCAAAGAGTC--TGACCTTCTGGCTCGAAAGAGTTGGCCAAACTGGGCAATCACCGTCA 1816
Query 232 TGCTGGGGATAG-AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290
|| ||||| | ||| ||| |||| || | | | |||||||||| ||||||||| |
Sbjct 1815 TGACAGGGATCGGAGC-TTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTACAA 1757
Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||| ||| ||| ||||||||| |||||||||||||
Sbjct 1756 GGCATAAGCTTGCGCTGATTACGTGCCTGCCCTTTGTA 1719
>seq24567
Length=3406
Score = 105 bits (116), Expect = 1e-20
Identities = 162/225 (72%), Gaps = 12/225 (5%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTG-GGCCGCACGCGCGCTACAC 167
||||| ||| || |||||||||||||||||||||| |||| ||| || |||||||||||
Sbjct 2253 TTGAG-CAAGAAGAGGTCTGTGATGCCCTTAGATG-TCTGAGGCTGCGCGCGCGCTACAA 2310
Query 168 TGACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAA----TCTTGTTAA 222
|||| | |||||||| | | || | ||| || ||| ||| ||| || ||
Sbjct 2311 TGACGGTCGCAACGAGTCTGGCCTTCTGGTCCGAAA----TGGTTAAACAGTCTGGTCAA 2366
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||| || | ||| | | ||| |||| || | | | |||||||||| | ||||
Sbjct 2367 TCACCGTCATGACAGTGATCGGGGCTTGGAATTGTTCCGCGTGAACGAGGAATTCATAGT 2426
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327
| | || ||| | ||| ||| |||| |||||| ||||||||||
Sbjct 2427 ATGTGCAAGTCCTGAGCTTGCGCTGATAACGTCCTTGCCCTTTGT 2471
>seq7813
Length=21067
Score = 105 bits (116), Expect = 1e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTG-GGCCGCACGCGCGCTACAC 167
||||| ||| || ||||||||||||||||||| || |||| ||| |||||| | |||||
Sbjct 19632 TTGAG-CAAGAAGAGGTCTGTGATGCCCTTAGTTG-TCTGTGGCTGCACGCCCCCTACAA 19689
Query 168 TGACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226
||| | | |||||||| | | || | ||| |||| |||| || || || || | |
Sbjct 19690 GGACGGTGTCAACGAGTCTGGCCTTCTGGTCCGAAAGGGATGGGCAAACTGGTCAATCAC 19749
Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286
|||| || ||||||| | ||| ||| || | | | |||||||||||| ||||| |
Sbjct 19750 TGTCATGACAGGGATAGGGGCTTGGAATAGTTACCCGTGAACGAGGAATGCATAGTATGT 19809
Query 287 GCGTGTCATCAGCACGCGTTGATTAC 312
|| ||||| ||| | | ||||||
Sbjct 19810 GCAAGTCATGAGCTTGTGCCGATTAC 19835
>seq24943
Length=3245
Score = 104 bits (114), Expect = 4e-20
Identities = 155/216 (72%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||| |||||||||||| ||| | | ||| ||||| || |||| | ||| |
Sbjct 1593 CAATAAGAGGTCTGTGATGACCTCAAAGTTTCGGGGCCAAGCGTAGGCTATAATGAGTGT 1652
Query 175 GCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||||||||| | | | || | ||| || | |||| || || || || | | ||| ||
Sbjct 1653 GCCAACGAGTCTGACCTTCTGGCCCGAAAAGATTGGGCAAACTGGTCAATCGCCGTCATG 1712
Query 234 CTGGGGATAG-AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
||||| | ||| ||| |||| || | | | |||||||||| ||||||||| || |
Sbjct 1713 ACAGGGATCGGAGC-TTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTGCAAGG 1771
Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||| | | ||||||||| |||||||||||||
Sbjct 1772 TATAAGCTTGAGCTGATTACGTTCCTGCCCTTTGTA 1807
>seq6452
Length=25202
Score = 89.7 bits (98), Expect = 1e-15
Identities = 149/214 (70%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 116 AATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAG 175
||| | |||||||||||||||| | ||| || ||||| || || ||| | ||| |
Sbjct 9833 AATTAGAGGTCTGTGATGCCCTAAAATGGTCGGGGCCACATGCCAGCTCTAATGATGATG 9774
Query 176 CCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGC 234
||||||||| | | | || | ||| ||| |||| || || || || | | ||| ||
Sbjct 9773 CCAACGAGTCTGAACTTCTGGCCCGAAAGCGTTGGGCAAACTGGTCAATCGCCGTCATGA 9714
Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294
| ||| | ||| |||| || | | ||| ||||| |||||||| || | ||
Sbjct 9713 CAGTGATCAGGGTTTGGAATTGTTCCCCCAGAACATGGAATTTCTAGTAAGTGCAAGGCA 9654
Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||| ||| |||||| ||||||||||||||||
Sbjct 9653 TAAGCTTGCGCTGATTATGTCCCTGCCCTTTGTA 9620
>seq21262
Length=4742
Score = 86.0 bits (94), Expect = 1e-14
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| ||| || | |||| || |||| || | | ||| || ||||| | | ||||
Sbjct 2977 CTTGCCCGAAAAGGTTGGGCAAATTTGTCAATCACCGTCATGACTGGGATTGGGGATTGG 3036
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|||| || | ||| |||||||||| ||| ||| | || ||||| ||| ||| |||| |
Sbjct 3037 AATTGTTCCCCTTGAACGAGGAATACCTTGTATGTGCAAGTCATAAGCTTGCGCTGATAA 3096
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||| ||||||
Sbjct 3097 CGTCCCTGCCGTTTGTA 3113
>seq23355
Length=3894
Score = 73.4 bits (80), Expect = 7e-11
Identities = 54/63 (86%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325
||||||||| ||||||||| ||| ||||| ||| ||| ||||||||||||||| ||||
Sbjct 2409 AACGAGGAACTCCTAGTAAGTGCGAGTCATAAGCTTGCGCTGATTACGTCCCTGCACTTT 2468
Query 326 GTA 328
|||
Sbjct 2469 GTA 2471
>seq12250
Length=12257
Score = 73.4 bits (80), Expect = 7e-11
Identities = 110/155 (71%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 175 GCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||||||||| | | | || | ||| ||| |||| || || || | | | ||| ||
Sbjct 5318 GCCAACGAGTCTGACCTTCTGGCCCGAAAGAGTTGGGCAAACTGGTCAGTCACCGTCATG 5377
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
||| | | | ||| |||| || | | | || ||||||| ||||||||| || | |
Sbjct 5378 ACAGGGGTCGTGGCTTGGAATTGTTCCCCGTGAAGGAGGAATTCCTAGTAAGTGCAAGGC 5437
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||| ||| ||||||||||||||| |||||||
Sbjct 5438 ATAAGCTTGCGCTGATTACGTCCCTGCTCTTTGTA 5472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946662198784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |