Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25]
60,140 sequences; 344,202,215 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq47923 131 7e-28
seq1451 127 9e-27
seq44242 107 8e-21
seq8343 98.7 4e-18
>seq47923
Length=797
Score = 131 bits (144), Expect = 7e-28
Identities = 110/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || |||| |||||||||||||||||||||||| || || |||||
Sbjct 197 GAGCAAGAGCGTACACGTTGAGACCCGAAAGATGGTGAACTATGCTTGTGAGGGTTGAAG 256
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||| | || |||| ||||| ||||||||| | |||| ||
Sbjct 257 CCAGAGGAAACTCTGGTGGACGACCGTAGCGATTCTGACGTGCAAATTGGTCGTATAACG 316
Query 669 TGGGTATAGGGGCGA 683
|| ||||||||||||
Sbjct 317 TGAGTATAGGGGCGA 331
>seq1451
Length=31518
Score = 127 bits (140), Expect = 9e-27
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || |||| |||||||| ||| ||||| ||||| || ||| |||||
Sbjct 9328 GAGCAAGAGCGTACACGTTGAGACCCGAACGATAGTGAAATATGCTTGTGAAGGTTGAAG 9387
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || ||| ||||| |||||||||||||||| ||
Sbjct 9388 CCAGAGGAAACTCTGGTGGAGGACCGTAGCAATTCTGACGTGCAAATCGATCGTATAACG 9447
Query 669 TGGGTATAGGGGCGA 683
|| | ||||||||||
Sbjct 9448 TGAGCATAGGGGCGA 9462
>seq44242
Length=949
Score = 107 bits (118), Expect = 8e-21
Identities = 105/135 (78%), Gaps = 3/135 (2%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| || ||| || |||| ||||||||||||||||||||||||||| ||| | |||
Sbjct 280 GAGCAAAAGCGTACACGTTGAGACCCGAAAGATGGTGAACTATGCCTGTGAAGGTTAAAG 339
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||| ||||||||| ||||| ||||| | | ||| ||| |||||| ||||| ||
Sbjct 340 CCAGTGGAAACTCTAGTGGA---CCGCAGTGATCCTGACGTACAAATCAATCGTATAAGG 396
Query 669 TGGGTATAGGGGCGA 683
|| |||||| |||||
Sbjct 397 TGAGTATAGAGGCGA 411
>seq8343
Length=11663
Score = 98.7 bits (108), Expect = 4e-18
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
|||||||||| || ||| ||||||||||||||||| | |||| || ||| |||||
Sbjct 10333 GAGTAAGAGCGTATACATTGAGACCCGAAAGATGGTGAGCCATGCTTGCGAAGGTTGAAG 10274
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||||| |||||| ||||||| || || | |||| ||||||||| ||||| ||
Sbjct 10273 CCAGAGGTAACTCTAGTGGAGGGCCGTAGTGATTCTCACGTGCAAATAAATCGTATAACG 10214
Query 669 TGGGTAT 675
|| ||||
Sbjct 10213 TGAGTAT 10207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078709997000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |