Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25]
60,140 sequences; 344,202,215 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq57422 190 3e-46
seq1495 178 2e-42
seq70 176 7e-42
seq83 125 1e-26
seq17409 118 2e-24
seq1458 114 2e-23
seq6438 111 3e-22
seq89 104 4e-20
seq18913 96.9 6e-18
seq15782 96.9 6e-18
seq7498 89.7 8e-16
seq13426 87.8 3e-15
seq2191 84.2 3e-14
seq32503 80.6 4e-13
seq16722 78.8 1e-12
>seq57422
Length=565
Score = 190 bits (210), Expect = 3e-46
Identities = 214/282 (76%), Gaps = 26/282 (9%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| |||||| |||||||| |||| ||||| | || |||||||||||||||||
Sbjct 230 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCCCCGGACGTCTAAGGGCATCACAGA 289
Query 62 CCTGTTATTGCCTCAAACTT---CCA-TTGGCTGG---AAGCCAATAGTCCCTCT--AAG 112
||||||||||| || | || | | || ||| | | | | | | || | |||
Sbjct 290 CCTGTTATTGC-TCGATCTCGTGCGACTTAACTGTGCCACGACCACACTACCCCATAAAG 348
Query 113 AAGCCA-----GCCAC--------CAACCATAGTCGATGGGGCTA---TTTAGCAGGTTA 156
|||| | ||| | | | || || || | ||| ||||||||||||
Sbjct 349 AAGCAATAGAAGCCGCGCTCTAAGCGAGCACAGAGGACCAGTCTACTATTTAGCAGGTTA 408
Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216
| |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 409 AAGTCTCGTTTGTTATCGGAATTAACCAGACAAATTGCTCCACAAACTAAGAACGGCCAT 468
Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||| |||||||||| ||||||||||||||||
Sbjct 469 GCACCACCACCCACCGAATCAAGAATGAGCTATCAATCTGTC 510
>seq1495
Length=31017
Score = 178 bits (196), Expect = 2e-42
Identities = 107/113 (95%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 3861 CTATTTAGCAGGTTAAAGTCTCGTTCGTCATCGGAATTAACCAGACAAATCGCTCCACCA 3920
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
|||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 3921 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTGTCAATC 3973
Score = 93.3 bits (102), Expect = 7e-17
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| ||| || |||||||| |||| ||||| | ||||||||||||||||||||
Sbjct 3651 ACTCGTTGGCACCGCCATTGTAGCGCACGTGTGGCCCCGGACATCTAAGGGCATCACAGA 3710
Query 62 CCTGTTATTGCCTCAA 77
|||||||||| |||||
Sbjct 3711 CCTGTTATTG-CTCAA 3725
>seq70
Length=77654
Score = 176 bits (194), Expect = 7e-42
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 40886 CTATTTAGCAGGTTAAAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 40945
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||| ||||||||||||| |||| |||||||||||||| |||||||| |||
Sbjct 40946 ACTAAGAACTGCCATGCACCACCGCCCACCGAATCAAGAAAGAGATATCAATCCGTC 41002
>seq83
Length=75776
Score = 125 bits (138), Expect = 1e-26
Identities = 72/74 (97%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 16554 CTATTTAGCAGGTTAAAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 16495
Query 202 ACTAAGAACGGCCA 215
||||||||||||||
Sbjct 16494 ACTAAGAACGGCCA 16481
Score = 89.7 bits (98), Expect = 8e-16
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| |||||| |||| || |||| ||||| | ||||||||||||||||||||
Sbjct 16764 ACTCGCTGGCACCGTCATTGTATTGCACGTGTGGCCCCGGACATCTAAGGGCATCACAGA 16705
Query 62 CCTGTTATTGCCTCAA 77
|||||||||| |||||
Sbjct 16704 CCTGTTATTG-CTCAA 16690
>seq17409
Length=5445
Score = 118 bits (130), Expect = 2e-24
Identities = 71/75 (95%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1488 CTATTTAGCAGGTTAAAGTCTCGTTCGTTATCTGAATTAACCAGACAAATCGCTCCACCA 1429
Query 202 ACTAAGAACGGCCAT 216
|||||||||||| ||
Sbjct 1428 ACTAAGAACGGCTAT 1414
Score = 89.7 bits (98), Expect = 8e-16
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| | || |||||| |||||||| |||| |||| | ||||||||||||||||||||
Sbjct 1698 ACTCGCTTGCACCGTCATTGTAGCGCACGTGTGGCCTCGGACATCTAAGGGCATCACAGA 1639
Query 62 CCTGTTATTGCCTCAA 77
|||||||||| |||||
Sbjct 1638 CCTGTTATTG-CTCAA 1624
>seq1458
Length=31436
Score = 114 bits (126), Expect = 2e-23
Identities = 78/88 (89%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 170 TATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCA 229
||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct 23584 TATCGGAGTTAACCAGAAGAATTTCTCCACCAACTAAGAACGGCCATGCACCATCACCCA 23525
Query 230 TAGAATCAAGAAAGAGCTATCAATCTGT 257
|||||| |||||| ||||||||||||
Sbjct 23524 CCGAATCAGGAAAGAACTATCAATCTGT 23497
>seq6438
Length=14192
Score = 111 bits (122), Expect = 3e-22
Identities = 79/91 (87%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||||||||||||||||||||| || ||| ||||||||| ||| ||||||| ||| |
Sbjct 2930 GTTATCGGAATTAACCAGACAAATCGCTACACTAACTAAGAATGGCTATGCACCGCCATC 2871
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|| ||||| ||||||||||||||| ||||
Sbjct 2870 CACTGAATCGGGAAAGAGCTATCAATTTGTC 2840
>seq89
Length=74092
Score = 104 bits (114), Expect = 4e-20
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||||| | |||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 55854 CTATTTAGGAGGTTTAAGTCTCGTTCGTTATCGAAATTAACCGGACAAATCGCTCCACCA 55795
Query 202 ACTAAGAACGGCCAT 216
|||||||||||| ||
Sbjct 55794 ACTAAGAACGGCTAT 55780
>seq18913
Length=4889
Score = 96.9 bits (106), Expect = 6e-18
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTT-AAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
||||||| |||||| ||| ||| ||| || ||||||||||||||||||| || |||||||
Sbjct 3761 CTATTTATCAGGTTGAAGTTCTTGTTTGTCATCGGAATTAACCAGACAAGTCGCTCCACC 3702
Query 201 AACTAAGAACGGCCATGC 218
|||||| |||||||||||
Sbjct 3701 AACTAAAAACGGCCATGC 3684
Score = 78.8 bits (86), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 3/77 (4%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGC-CCAGAACATCTAAGGGCATCACAG 60
||||| |||| |||||| |||||||| |||| | | ||||| ||||||||||||||||||
Sbjct 3970 ACTCGTTGGCACCGTCATTGTAGCGCACGTGTGTCTCCAGA-CATCTAAGGGCATCACAG 3912
Query 61 ACCTGTTATTGCCTCAA 77
|| ||||||| |||||
Sbjct 3911 ACGCGTTATTG-CTCAA 3896
>seq15782
Length=6152
Score = 96.9 bits (106), Expect = 6e-18
Identities = 74/88 (84%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 171 ATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCAT 230
|||||||||| | ||||||| || ||||||| |||||||| || |||||||||| |
Sbjct 3560 ATCGGAATTACCTGGACAAATTGCTGCACCAACAAAGAACGGTTATACACCACCACCGAC 3501
Query 231 AGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| ||||||||||||
Sbjct 3500 CGAATCAAGAAAGAGGTATCAATCTGTC 3473
>seq7498
Length=12697
Score = 89.7 bits (98), Expect = 8e-16
Identities = 61/69 (88%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
|||||||||| |||| |||||||| |||| ||||| ||||||||| |||||| ||||||
Sbjct 4522 TATTTAGCAGTTTAAAGTCTCGTTGGTTACCGGAACTAACCAGACGAATCACCTCACCAA 4581
Query 203 CTAAGAACG 211
|||||||||
Sbjct 4582 CTAAGAACG 4590
>seq13426
Length=7388
Score = 87.8 bits (96), Expect = 3e-15
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||||||| |||| ||| ||| | |||| ||||||| ||||| ||||||||
Sbjct 3286 CTATTTAGCAGGTTAAAGTCTTGTTTGTTGTTAGAATCAACCAGATAAATCGCTCCACCA 3227
Query 202 ACTAAGAACGGCCATGCA 219
||||| || |||||| ||
Sbjct 3226 ACTAAAAATGGCCATCCA 3209
>seq2191
Length=26383
Score = 84.2 bits (92), Expect = 3e-14
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
|||| |||| |||||| |||||||| ||||||||| | |||||||| |||||||||||
Sbjct 20471 ACTCATTGGCACCGTCATTGTAGCGCATGTGCGGCCCCGGACATCTAACGGCATCACAGA 20412
Query 62 CCTGTTATTGCCTCAA 77
| |||||||| |||||
Sbjct 20411 CATGTTATTG-CTCAA 20397
>seq32503
Length=1934
Score = 80.6 bits (88), Expect = 4e-13
Identities = 62/74 (84%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 144 ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203
|||||| |||| || ||||| ||||||||||||||||||| ||| ||||| |||||||
Sbjct 614 ATTTAGGAGGTCAACGTCTCATTCGTTATCGGAATTAACCCGACCAATCATCTCACCAAC 555
Query 204 TAAGAACGGCCATG 217
||||| || ||||
Sbjct 554 TAAGAGCGATCATG 541
>seq16722
Length=5726
Score = 78.8 bits (86), Expect = 1e-12
Identities = 59/68 (87%), Gaps = 1/68 (1%)
Strand=Plus/Plus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAA 209
||| | || |||||||| |||||| |||||||||||||||||||| | | |||||||||
Sbjct 3087 CAGATCAACGTCTCGTTTGTTATCAGAATTAACCAGACAAATCAC-CTTCAAACTAAGAA 3145
Query 210 CGGCCATG 217
||||||||
Sbjct 3146 CGGCCATG 3153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796335779340
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