Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25]
60,140 sequences; 344,202,215 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq17409 95.1 7e-18
seq1495 91.5 9e-17
seq57422 86.0 4e-15
seq70 78.8 6e-13
seq10214 73.4 2e-11
seq2412 73.4 2e-11
>seq17409
Length=5445
Score = 95.1 bits (104), Expect = 7e-18
Identities = 69/76 (91%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1884 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1827
Query 109 TAATACAACGCAAGCT 124
|||| || ||||||||
Sbjct 1826 TAAT-CAGCGCAAGCT 1812
>seq1495
Length=31017
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||||| || ||||||||| || |||||||| ||||||||||||||||||||
Sbjct 3460 CTCACTAAACCATT-CAATCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACG 3517
Query 109 TAATACAACGCAAGCT 124
|||| || ||||||||
Sbjct 3518 TAAT-CAGCGCAAGCT 3532
>seq57422
Length=565
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||||| || ||||||| || ||||||||| ||||||||||||||||||||
Sbjct 44 CTCACTAAACCATT-CAATCGGTAGAAA-CGACGGGCGTTGTGTACAAAGGGCAGGGACG 101
Query 109 TAATACAACGCAAGCT 124
|||| || ||||||||
Sbjct 102 TAAT-CAGCGCAAGCT 116
>seq70
Length=77654
Score = 78.8 bits (86), Expect = 6e-13
Identities = 78/96 (81%), Gaps = 5/96 (5%)
Strand=Plus/Plus
Query 29 CAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGG 88
|||||||| | | || | |||||||| ||||| || ||| ||||| |||||||||||
Sbjct 40655 CAAAGCCACTAC--AACGACCTCACTAAACCATT-CAATCGATAGTA-GCGACGGGCGGT 40710
Query 89 GTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||| | ||||||||
Sbjct 40711 GTGTACAAAGGGCAACGACGTAAT-TAGCGCAAGCT 40745
>seq10214
Length=9767
Score = 73.4 bits (80), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||||| || |||||||| || |||||||| |||||||||| |||||||||
Sbjct 7765 CTCACTAAACCATTCGAT-CGGTAGTA-GCAACGGGCGGTGTGTACAAAGAGCAGGGACG 7708
Query 109 TAATACAACGCAAG 122
|||| || |||||
Sbjct 7707 TAAT-CAGAGCAAG 7695
>seq2412
Length=25113
Score = 73.4 bits (80), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| ||||| || ||||||||| || || ||||| |||| ||||||||||||||
Sbjct 823 CTCACTAAACCATT-CAATCGGTAGTA-GCAACTGGCGGTGTGTTCAAAGGGCAGGGACT 766
Query 109 TAATACAACGCAAGCT 124
|||| || | ||||||
Sbjct 765 TAAT-CAGCACAAGCT 751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300630405200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |