Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25]
60,140 sequences; 344,202,215 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq59378 109 6e-22
seq70 89.7 5e-16
seq39755 84.2 2e-14
>seq59378
Length=519
Score = 109 bits (120), Expect = 6e-22
Identities = 132/176 (75%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTACCATG 70
||||||||||| ||||| ||| | ||||||||||||| ||| | ||| | | ||||
Sbjct 220 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCGCCTGAAAATTCTTGCATG 161
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| |||||||| | |||||||||||||| ||||| | ||| | |||||| |
Sbjct 160 GAATAATGAAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGT 103
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
|| | ||| || |||||| | |||| ||| | |||||||||||| ||||
Sbjct 102 TAAGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTGGGAT 47
>seq70
Length=77654
Score = 89.7 bits (98), Expect = 5e-16
Identities = 130/183 (71%), Gaps = 11/183 (6%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTA------- 65
||||||||||| ||||| ||| | ||||||||||||| ||| | | ||||
Sbjct 41501 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCGCCTGAAAATTANNNNNNN 41442
Query 66 --CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
||||||||||| |||||||| | |||||||||||||| ||||| | ||| | |
Sbjct 41441 NNNCATGGAATAATGAAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAG 41384
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||| | || | ||| || ||| || | ||| ||| | |||||||||||| |
Sbjct 41383 TAATGGTTAAGAGGGACAGACGGAGGCATTTGTACGGCGGTGTTAGAGGTGAAATTCTGG 41324
Query 184 GAT 186
|||
Sbjct 41323 GAT 41321
>seq39755
Length=1220
Score = 84.2 bits (92), Expect = 2e-14
Identities = 100/132 (76%), Gaps = 4/132 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTACCATG 70
||||||||||| ||||| ||| | |||||||||| |||||| | ||| | || ||||
Sbjct 261 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGACTTTGCGCCTGAAAATTTTTTCATG 202
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| ||||||| | | ||||||||||| |||| ||| ||| |||||| |
Sbjct 201 GAATAATGACATAGGAC-TTCATTTCTATTTTGTTTGTTTTCAGGTCCG-AAGTAATGGT 144
Query 131 AAATACGGATAG 142
|| ||||| ||
Sbjct 143 TAAAACGGACAG 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511701705600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |