Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06-
09] 29,834 sequences; 375,894,156 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq564 93.3 4e-17
seq378 75.2 1e-11
>seq564
Length=206412
Score = 93.3 bits (102), Expect = 4e-17
Identities = 106/139 (76%), Gaps = 4/139 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTACCATG 70
||||||||||| ||||| ||| | ||||||||||||| ||| | ||| | | ||||
Sbjct 119364 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCGCCTGAAAATTATTGCATG 119305
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| |||||||| | |||||||||||||| ||||| | ||| | |||||| |
Sbjct 119304 GAATAATGAAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGT 119247
Query 131 AAATACGGATAGTCGGGGG 149
|| | ||| || |||||
Sbjct 119246 TAAGAGGGACAGATGGGGG 119228
>seq378
Length=296469
Score = 75.2 bits (82), Expect = 1e-11
Identities = 98/132 (74%), Gaps = 4/132 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACAT--TACCATG 70
||||||||||| ||||| ||| | ||||||||| |||||| | | | || | ||||
Sbjct 199920 TTTACTTTGAACAAATTTGAGTGCCCAAAGCAGGACTTTGCGCCTAAAAATTCTTTCATG 199979
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| ||||||| | | ||||||||||| |||| ||| ||| |||||| |
Sbjct 199980 GAATAATGACATAGGAC-TTCATTTCTATTTTGTTTGTTTTCAGGTCCG-AAGTAATGGT 200037
Query 131 AAATACGGATAG 142
|| ||||| ||
Sbjct 200038 TAAGACGGACAG 200049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511852023360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |