Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06-
09] 29,834 sequences; 375,894,156 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq167 244 3e-62
seq940 232 2e-58
seq71 190 6e-46
seq52 185 3e-44
seq397 176 1e-41
seq426 167 7e-39
seq78 140 1e-30
seq4 113 1e-22
seq179 111 5e-22
seq47 104 7e-20
seq1091 82.4 2e-13
seq311 77.0 1e-11
>seq167
Length=484514
Score = 244 bits (270), Expect = 3e-62
Identities = 302/405 (75%), Gaps = 26/405 (6%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATT-GTCACTAC 58
|||||||||| ||||| || || ||| ||| || || || |||||| || ||||||||
Sbjct 309110 GTACTCATTCGAATTAAAAAGCCTCAATGGAGTCCCGTGTCCGTATTTTTTTGTCACTAC 309051
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
||| | ||| ||||| |||||||||| |||||||||||| |||||||||||||||||
Sbjct 309050 CTCTCTGTGCCGGGAGTGGGTAATTTAAGCGCCTGCTGCCGTCCTTGGATGTGGTAGCTA 308991
Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178
||| |||| || ||||||||||||| |||||| ||| ||||||| | ||| | |||||
Sbjct 308990 TTTATCAGACTTCCTCTCCGGAATCAAACCCTGATTACCCGTTATCTGTTATCATCATGG 308931
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
||||| | | |||| || | || |||||||| ||| ||||||| || || ||||||
Sbjct 308930 TAGGCAAATCACCTATCAAC--AAACTGATAGGGTAGATATTTGAAAGATCCGTCGCCGA 308873
Query 239 CTCAAGGCC--ATGCGATTCGTTAAGTTATTATGAATCACCAAGGA---------GCCC- 286
| ||||||| || ||| || ||||||| | ||| || || || |
Sbjct 308872 CACAAGGCCGACTGTGATCAGTAAAGTTATCCAAAGTCATCACAGAATGTAACAGGCACA 308813
Query 287 --CGAAGGGCGTTGGTTTTTTATCTAATAAATACA-----CCCCTTCCGAAGTCGGGGTT 339
|||| |||||| | | |||||||||| || |||||| || ||| ||| |
Sbjct 308812 AATGAAGCCGATTGGTTCTGT-TCTAATAAATGCACCTGTCCCCTTGCG-GGTCAGGGAT 308755
Query 340 TTTA-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383
|| | |||||||||||||||| |||||| || |||||||||||||
Sbjct 308754 TTAAGGCATGTATTAGCTCTATAATTACTACAGTTATCCATGTAG 308710
>seq940
Length=103742
Score = 232 bits (256), Expect = 2e-58
Identities = 312/427 (73%), Gaps = 37/427 (9%)
Strand=Plus/Plus
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
|| |||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 60639 TTAGATGTGCTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCAGATTCTCCGTTA 60698
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
| | |||| ||| | | | |||| || | || |||||| |||||| |||||
Sbjct 60699 TC-------ATCATGATAGCCAAATTACCTATCAACAAA--TTGATAAGGCAGACATTTG 60749
Query 223 AATGAACCATCGCCGGCTCAAGGCC--ATGCGATTCGTTAAGTTATTATGAATCACCA-A 279
|| || || |||||| | ||||||| ||||||| || ||||||| | ||| || |
Sbjct 60750 AAAGATCCTTCGCCGACACAAGGCCGAATGCGATCAGTAAAGTTATCCAGGGTCATCACA 60809
Query 280 G-------GAGCC----CCGAAGGGCG------TTGGTTTTTTATCTAATAAATACACCC 322
| ||| | |||||| |||||| | | |||||||||| |||||
Sbjct 60810 GAATGTTAGAGACACAGCCGAAGCCTCACCCTATTGGTTCTGT-TCTAATAAATGCACCC 60868
Query 323 CTTCCGAAG----TCGGGGTTTTTAG-CATGTATTAGCTCTAGAATTACCACGGTTATCC 377
|||| | || ||| || || ||||||||||||||||||||| || ||||| |
Sbjct 60869 GTTCCCTTGCGGGTCAGGGATTCAAGGCATGTATTAGCTCTAGAATTATTACAGTTATTC 60928
Query 378 ATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC 437
|||||| | ||| || || ||| ||| |||||| | ||||| ||||| |||||||
Sbjct 60929 ATGTAGCATT-TACGATATAAAGAACCATAGCTGATTCAGTGAGCTATTCGTGGTTTCAC 60987
Query 438 TGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTA 497
|| | | | | ||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 60988 CGTTTTAAG-GTATGTACTTAGACATTCATGGCTTAATCTCTGAGACAAGCATATGACTA 61046
Query 498 CTGGCAG 504
|||||||
Sbjct 61047 CTGGCAG 61053
>seq71
Length=672713
Score = 190 bits (210), Expect = 6e-46
Identities = 175/215 (81%), Gaps = 10/215 (5%)
Strand=Plus/Minus
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTC-----CGAAGTCGGGGTTTTTAG-CATGT 349
|||||| | | |||||||||||||||| ||| || ||| ||| || || |||||
Sbjct 377653 TTGGTTCTGT-TCTAATAAATACACCCGTTCTCTTGCGG-GTCAGGGATTCAAGGCATGT 377596
Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409
||||||||||||||||| || ||||||||||||||| ||| ||| || ||| ||| |
Sbjct 377595 ATTAGCTCTAGAATTACTACAGTTATCCATGTAGTATT-TACGATCTAAGGAACCATAGC 377537
Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469
||||| |||||||||||||| ||||||| || | | | | |||||||||||||||||
Sbjct 377536 TGATTCAATGAGCCATTCGCGGTTTCACCGTTTTAAG-GTATGTACTTAGACATGCATGG 377478
Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||| ||||||||| ||||||||||||||||
Sbjct 377477 CTTAATCTCTGAGACAAGTATATGACTACTGGCAG 377443
>seq52
Length=730220
Score = 185 bits (204), Expect = 3e-44
Identities = 141/164 (86%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATA 400
|||||||||||||||||||||||||| || ||||||||||||| | ||| ||| ||
Sbjct 182453 TTAGCATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAGCATT-TACGATCTAAGG 182511
Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460
||| ||| ||||||||||||||||||||| ||||||| || | | | | ||||||||
Sbjct 182512 AACCATAGCTGATTTAATGAGCCATTCGCGGTTTCACCGTTTTAAG-GTATGTACTTAGA 182570
Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 182571 CATGCATGGCTTAATCTCTGAGACAAGCATATGACTACTGGCAG 182614
>seq397
Length=287344
Score = 176 bits (194), Expect = 1e-41
Identities = 297/417 (71%), Gaps = 21/417 (5%)
Strand=Plus/Plus
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
||||||||| | || ||| |||||||| ||||||||||||||||||| ||||| |||||
Sbjct 195297 TTGGATGTGTCAACCATTTGTCAGGCTCTCTCTCCGGAATCGAACCCTGATTCCTCGTTA 195356
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
||| || |||||||||| | | |||| | | || ||||||||| ||| |||||
Sbjct 195357 CCCTTTATCGTCATGGTAGGCAAATCACCTATGAACAAA--TTGATAGGGGAGACATTTG 195414
Query 223 AATGAACCATCGCCGGCTCAAGGCCAT-GCGAT-TCGTTAAGTTATTAT-GAATC-ACCA 278
|| | || ||||| | ||| | | | | | || || | || | |||| | ||
Sbjct 195415 AAAGGTCCTTCGCCAACCCAACCCAGTAGAGCTATCCAGAA-TCATCACAGAATGTAACA 195473
Query 279 AGGAGCCCCGAAGGG-----CGTTGGTTTTTTATCTAATAAATACACC-----CCTTCCG 328
| | |||||| || | | || | |||||| ||| |||| |||| ||
Sbjct 195474 GGTACAGTCGAAGGCTCATCCGATTGCTTCTGCTCTAATGAATGCACCTAGACCCTTGCG 195533
Query 329 AAGTCGGGGTTTTTAG-CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG 387
||| ||| || || |||| ||||| ||||||| ||| || ||||||||| |||
Sbjct 195534 G-GTCAGGGATTCAAGGCATGCATTAGTTCTAGAACTACTACAGTTATCCATTTAGCGTT 195592
Query 388 GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447
||| ||| || ||| ||| || ||||||| |||||||| ||||||| || | |
Sbjct 195593 -TACGATCTAAGGAACCATAGCTCATTTAATAGCCCATTCGCGGTTTCACCGTTTTAAG- 195650
Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| | ||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 195651 GTATGTACTTAGACATGCATGGCTTAATACCTCAGACAAGCATATGACTACTGGCAG 195707
>seq426
Length=271708
Score = 167 bits (184), Expect = 7e-39
Identities = 134/159 (84%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405
||||||||||||||||||||| || ||||||||||||||| ||| | | || ||| |
Sbjct 41029 ATGTATTAGCTCTAGAATTACTACAGTTATCCATGTAGTATT-TACGACCTAAGGAACCA 40971
Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465
|| ||||||||||||||||||||| | ||||| || | | | | |||||||||||||
Sbjct 40970 TAGCTGATTTAATGAGCCATTCGCGGCTTCACCGTTTTAAG-GTATGTACTTAGACATGC 40912
Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||| ||||||||| ||||||||||||||||
Sbjct 40911 ATGGCTTAATCTCTGAGACAAGGATATGACTACTGGCAG 40873
>seq78
Length=650918
Score = 140 bits (154), Expect = 1e-30
Identities = 166/218 (76%), Gaps = 13/218 (6%)
Strand=Plus/Minus
Query 296 TTGGTTTTTTATCTAATAAATACACC-----CCTTCCGAAGTCGGGGTTTTTAG-CATGT 349
|||||| | | |||||||||| ||| |||| || ||| ||| || || |||||
Sbjct 567680 TTGGTTCTGT-TCTAATAAATGTACCTGTCCCCTTGCGG-GTCAGGGATTCAAGACATGT 567623
Query 350 ATTAG---CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGAT 406
| ||| | |||||||||| || ||||||||||||| | ||| ||| || |||| ||
Sbjct 567622 AGTAGTAGCACTAGAATTACTACAGTTATCCATGTAGCATT-TACGATCTAAGAAACCAT 567564
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466
| ||||||||||||||||||||| |||||| || | | | | |||||||| ||| |
Sbjct 567563 AGCTGATTTAATGAGCCATTCGCGGTTTCATCGTTTTAAG-GTATGTACTTAGATATGTA 567505
Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||||||| |||||||||||||||| |||||||
Sbjct 567504 TAGCTTAATCTCTGAGACAAGCATATGAAGGCTGGCAG 567467
>seq4
Length=1430671
Score = 113 bits (124), Expect = 1e-22
Identities = 122/159 (77%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405
|| ||| ||| |||||| ||| || ||||||||||||| | ||| ||| || ||| |
Sbjct 283365 ATATATAAGCACTAGAAGTACTACAGTTATCCATGTAGCATT-TACGATCTAAGTAACTA 283307
Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465
| |||||||||| || | ||||| |||| || || | | | | ||||||| |||
Sbjct 283306 TCTCTGATTTAATAAGTCCTTCGCGGTTTTACCGTTTTAAG-GTATGTACTTAGGCATAT 283248
Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||| ||||||||| |||||||||||| |||
Sbjct 283247 ATGGCTTAATCTCTGAGACAAGTATATGACTACTGACAG 283209
>seq179
Length=460774
Score = 111 bits (122), Expect = 5e-22
Identities = 159/225 (71%), Gaps = 18/225 (8%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||| |||||| || |||| || | || ||| || ||||| || ||| ||||||||| |
Sbjct 327621 GTAATCATTCGAACTACAGAGCCTTAATTGAGTCCCGTATCTGTGTTTTTTGTCACTAAC 327680
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||| | | | ||||||||| || | ||||| | |||||||||||||||||| |
Sbjct 327681 TCCCCGTGACAGTAGCGGGTAATTTTCGTGACTGCTACAGTCCTTGGATGTGGTAGCCAT 327740
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|| | |||||||| ||| |||||||||||||||| | |||
Sbjct 327741 TT---------------CAGAATCGAAACCTGATTCCCCGTTACCCGTAATCTTTACGGT 327785
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224
|| | | | | || || | || |||||| |||||| |||||||
Sbjct 327786 AGACAAATCACATATCAAC--AAATTGATACGGCAGATATTTGAA 327828
>seq47
Length=754565
Score = 104 bits (114), Expect = 7e-20
Identities = 101/126 (80%), Gaps = 3/126 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTT-ATT-GTCACTA 57
|||||||||| |||||| || || ||| || | ||| |||||| ||| |||||||
Sbjct 329562 GTACTCATTCGAATTACGGAGCTTGAATTGAGTCCCGCATCTGTATTTTATTCGTCACTA 329503
Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117
||| || ||| |||| ||||||||||| | |||||||||| ||||||||||| ||||||
Sbjct 329502 CCTTCCTGTGCCGGGGTTGGGTAATTTTCACGCCTGCTGCTGTCCTTGGATGTAGTAGCC 329443
Query 118 GTTTCT 123
|||||
Sbjct 329442 ATTTCT 329437
>seq1091
Length=80651
Score = 82.4 bits (90), Expect = 2e-13
Identities = 82/105 (78%), Gaps = 1/105 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAA-GAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||| || |||||| ||| || ||| |||||||| |||||| | |||||||||
Sbjct 27442 GTACTCAATCGAATTACGGAACCTTAATTGAGTCCTGTATCCGTATTTTTCGTCACTACC 27383
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104
|||||||| || | |||||||||| ||||||| | || | |||
Sbjct 27382 TCCCCGTGCAGGAAGTGGGTAATTTTTGCGCCTGTTACCGTTCTT 27338
>seq311
Length=338269
Score = 77.0 bits (84), Expect = 1e-11
Identities = 48/52 (92%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 207701 TATTTAGACATGCATGACTTAATCTCTGAGACAAGCATATGACTACTGGAAG 207752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509949387264
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