Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_029627.1 Length=1802 Score E Sequences producing significant alignments: (Bits) Value seq12398 93.3 5e-16 >seq12398 Length=545 Score = 93.3 bits (102), Expect = 5e-16 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 165 GAACTCGCATGTAATATAAATATAAGCGCTGCTTATGTTAACATATCCGCCTTTATATTG 224 ||| ||||| |||||||| |||| || |||| ||||||||||| |||||| ||| Sbjct 296 GAATTCGCACGTAATATATATATTAGGTGAATTTATTTTAACATATCCTCCTTTAACTTG 237 Query 225 TCCTTGATAGGGGTATCTGTCTAATAATCGCAGGAAGTCTCGATATGGCCAATGACCATC 284 || ||||| ||||||||||| | ||||| |||| || || | ||||| | || || Sbjct 236 GCCCTGATAAGGGTATCTGTCAAGTAATCTAAGGAGATCGCGGAAAGGCCACTTTCCGTC 177 Query 285 AAAGTCATCAATTATGACGGCTTCCTGCTGAGTGTAGTTGTTCCACCACATTGTCCCGTC 344 || || || || | || | || || | |||| |||| |||||| ||| || || Sbjct 176 GAAATCGTCGATCAAGATAGTCTCTTGATTGTTGTAATTGTCCCACCATTGTGTTCCATC 117 Query 345 TTTGATATATA---CACTGT 361 || || |||| |||||| Sbjct 116 CTTTATGTATATGTCACTGT 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5655806618592