Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06-
09] 29,834 sequences; 375,894,156 total letters
Query= NC_029627.1
Length=1802
Score E
Sequences producing significant alignments: (Bits) Value
seq12398 93.3 5e-16
>seq12398
Length=545
Score = 93.3 bits (102), Expect = 5e-16
Identities = 141/200 (71%), Gaps = 3/200 (2%)
Strand=Plus/Minus
Query 165 GAACTCGCATGTAATATAAATATAAGCGCTGCTTATGTTAACATATCCGCCTTTATATTG 224
||| ||||| |||||||| |||| || |||| ||||||||||| |||||| |||
Sbjct 296 GAATTCGCACGTAATATATATATTAGGTGAATTTATTTTAACATATCCTCCTTTAACTTG 237
Query 225 TCCTTGATAGGGGTATCTGTCTAATAATCGCAGGAAGTCTCGATATGGCCAATGACCATC 284
|| ||||| ||||||||||| | ||||| |||| || || | ||||| | || ||
Sbjct 236 GCCCTGATAAGGGTATCTGTCAAGTAATCTAAGGAGATCGCGGAAAGGCCACTTTCCGTC 177
Query 285 AAAGTCATCAATTATGACGGCTTCCTGCTGAGTGTAGTTGTTCCACCACATTGTCCCGTC 344
|| || || || | || | || || | |||| |||| |||||| ||| || ||
Sbjct 176 GAAATCGTCGATCAAGATAGTCTCTTGATTGTTGTAATTGTCCCACCATTGTGTTCCATC 117
Query 345 TTTGATATATA---CACTGT 361
|| || |||| ||||||
Sbjct 116 CTTTATGTATATGTCACTGT 97
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5655806618592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |