Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq286 82.4 4e-14 seq20 82.4 4e-14 seq19 82.4 4e-14 seq5 82.4 4e-14 seq564 73.4 2e-11 >seq286 Length=4852 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| || |||||||||||||||| ||| || |||||| || Sbjct 2951 GGAAAAGAAACTAACGAGGATTTCCCTAGTAACGGCGAGTGAAAAGGAAAAAGCCCAACG 3010 Query 61 CCGAATCC 68 | |||||| Sbjct 3011 CTGAATCC 3018 >seq20 Length=54538 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 4169 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 4228 Query 61 CCGAATCC 68 ||||| || Sbjct 4229 CCGAAGCC 4236 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 13794 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 13853 Query 61 CCGAATCC 68 ||||| || Sbjct 13854 CCGAAGCC 13861 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 29643 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 29702 Query 61 CCGAATCC 68 ||||| || Sbjct 29703 CCGAAGCC 29710 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 39237 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 39296 Query 61 CCGAATCC 68 ||||| || Sbjct 39297 CCGAAGCC 39304 >seq19 Length=353814 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 1167 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 1226 Query 61 CCGAATCC 68 ||||| || Sbjct 1227 CCGAAGCC 1234 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 48044 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 48103 Query 61 CCGAATCC 68 ||||| || Sbjct 48104 CCGAAGCC 48111 >seq5 Length=1607214 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||| | Sbjct 1211569 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTGCGAGTGAACAGGGATTAGCCCAACA 1211510 Query 61 CCGAATCC 68 ||||| || Sbjct 1211509 CCGAAGCC 1211502 >seq564 Length=29324 Score = 73.4 bits (80), Expect = 2e-11 Identities = 57/68 (84%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||| |||||||||||||| |||| | | Sbjct 4493 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACTTCGAGTGAACAGGGATTAGCCAAACA 4552 Query 61 CCGAATCC 68 ||||| || Sbjct 4553 CCGAAGCC 4560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230398088400