Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq286 199 7e-49 seq36 190 4e-46 seq20 190 4e-46 seq5 187 5e-45 seq40 170 4e-40 seq682 163 5e-38 seq39 154 3e-35 seq1 152 1e-34 seq34 134 3e-29 seq578 131 3e-28 seq660 95.1 2e-17 seq564 80.6 5e-13 >seq286 Length=4852 Score = 199 bits (220), Expect = 7e-49 Identities = 202/258 (78%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 1413 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 1470 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | | Sbjct 1471 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 1529 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || ||| | | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 1530 CCATTATCGAAAGATATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 1589 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 1590 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 1649 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 1650 ACGTCCCTGCCCTTTGTA 1667 >seq36 Length=9384253 Score = 190 bits (210), Expect = 4e-46 Identities = 202/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 3011735 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 3011678 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 3011677 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 3011618 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 3011617 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 3011558 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 3011557 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 3011498 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 3011497 GATTACGTCCCTGCCCTTTGTA 3011476 Score = 89.7 bits (98), Expect = 1e-15 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| ||||||||||||||||||| |||||||||||| ||| | ||| ||||||| | Sbjct 4380236 TTGAG-CAATAACAGGTCTGTGATGTCCTTAGATGTTCAGGGTCACACATACGCTACAAT 4380178 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGA-AGGTCTGGGTAATCTTGTTAAACTCT 227 ||| | |||| ||| | | | | || || | || | || ||||| || | | | Sbjct 4380177 GACGGTGCCAGCGAATCTAGAAACCTGACCCAAGAGTGTTAGGCAATCTGTTTCATCACC 4380118 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||||| | || | | ||||| ||||| | | | ||| |||||| ||| |||| | Sbjct 4380117 GTCGTGAATAGAATCGGGGATTGCGATTATCCCCCGTGAACAAGGAATTCCTGATAAGTG 4380058 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| || ||| || |||| || ||||| ||| Sbjct 4380057 CAAGTCATAAGTTTGCGCTGGTTACAAAACTACCCTTAGTA 4380017 >seq20 Length=54538 Score = 190 bits (210), Expect = 4e-46 Identities = 202/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 2758 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 2815 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 2816 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 2875 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 2876 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 2935 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 2936 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 2995 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 2996 GATTACGTCCCTGCCCTTTGTA 3017 Score = 190 bits (210), Expect = 4e-46 Identities = 202/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 12389 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 12446 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 12447 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 12506 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 12507 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 12566 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 12567 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 12626 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 12627 GATTACGTCCCTGCCCTTTGTA 12648 Score = 190 bits (210), Expect = 4e-46 Identities = 202/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 28233 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 28290 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 28291 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 28350 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 28351 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 28410 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 28411 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 28470 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 28471 GATTACGTCCCTGCCCTTTGTA 28492 Score = 190 bits (210), Expect = 4e-46 Identities = 202/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 37826 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 37883 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 37884 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 37943 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 37944 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 38003 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 38004 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 38063 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 38064 GATTACGTCCCTGCCCTTTGTA 38085 >seq5 Length=1607214 Score = 187 bits (206), Expect = 5e-45 Identities = 201/262 (77%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 1212980 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 1212923 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 |||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 1212922 ATGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 1212863 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| | ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 1212862 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 1212803 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 1212802 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 1212743 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 1212742 GATTACGTCCCTGCCCTTTGTA 1212721 >seq40 Length=9743550 Score = 170 bits (188), Expect = 4e-40 Identities = 201/264 (76%), Gaps = 11/264 (4%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCG-ATGGAAGTTTGAGGCAATAACAGGTC 126 |||||||||||||| | |||| || || || ||| || ||||| |||||||||||| Sbjct 9029864 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCATGAAA--TTGAG-CAATAACAGGTC 9029920 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-T 185 |||||||||||||||||| || ||| |||| |||||||| |||| | |||| ||||| | Sbjct 9029921 TGTGATGCCCTTAGATGTCCTAGGCTACACGTGCGCTACAATGACGGTGCCAGCGAGTCT 9029980 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG-CTGGGGATAGA 244 |||| ||| |||| |||| || || | | | | |||||| |||||| || Sbjct 9029981 GGAAACCTGACCCGAAAGGATTGGGCAAACTGTCTCATCACCGTCGTGACTGGGGTCAGG 9030040 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 || ||||||||||| | | | |||||||||| ||| ||||| | ||||| ||| || Sbjct 9030041 GC-TTGCAATTATTCCCCATAAACGAGGAATTCCTGGTAAGTGGAAGTCATAAGCTTGCA 9030099 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||| |||||| Sbjct 9030100 CTGATTACGTCCCTGCCTTTTGTA 9030123 >seq682 Length=865254 Score = 163 bits (180), Expect = 5e-38 Identities = 196/263 (75%), Gaps = 9/263 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-----AGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 ||||||||| |||| | |||| || | | | ||| ||||| |||||||||||| Sbjct 348040 CTTCTTAGAAGGACAAGCGGCACACTTATATCGCACAGAA--TTGAG-CAATAACAGGTC 347984 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-T 185 |||||||||||||||||| | ||||| |||| || ||||| |||| | || | ||||| | Sbjct 347983 TGTGATGCCCTTAGATGTCCGGGGCCACACGTGCTCTACAATGACGGTGCTAGCGAGTCT 347924 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 |||| | ||| |||| |||| || || || | | | ||||| || || ||| Sbjct 347923 GGAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCATCGTGACTGGAATCGAG 347864 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| Sbjct 347863 GCTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGC 347804 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 |||| |||||||||||||||||| Sbjct 347803 TGATCACGTCCCTGCCCTTTGTA 347781 >seq39 Length=20039393 Score = 154 bits (170), Expect = 3e-35 Identities = 194/262 (74%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| ||||||||||||| Sbjct 2397254 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 2397311 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 |||||||||||| |||| | | | | |||| |||||||| |||| | |||| ||||| | Sbjct 2397312 GTGATGCCCTTAAATGTCCGGAGTCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 2397371 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| ||| |||| |||| || || || | | | ||| | ||||| | | Sbjct 2397372 GAAACCTGACCCGAAAGGGTTGGGCAAACTGTTTCATCACCATCGAGACTGGGATCGGGG 2397431 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | ||| |||||| ||| ||||| || ||||| ||| | | | Sbjct 2397432 CTTGCAATTATTCCCCGTGAACAAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGTGCT 2397491 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 2397492 GATTACGTCCCTGCCCTTTGTA 2397513 >seq1 Length=65476681 Score = 152 bits (168), Expect = 1e-34 Identities = 185/248 (75%), Gaps = 7/248 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||| | |||| || || || ||| || ||| |||||||| |||| Sbjct 36471982 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAAGTCT 36472039 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 |||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| | Sbjct 36472040 ATGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 36472099 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||| ||| |||| |||| || || || | | | |||||| ||||| | | Sbjct 36472100 GAAACCTGACCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 36472159 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| | Sbjct 36472160 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 36472219 Query 307 GATTACGT 314 |||||||| Sbjct 36472220 GATTACGT 36472227 Score = 136 bits (150), Expect = 7e-30 Identities = 190/262 (73%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||| ||| | || | || || || ||| || ||| ||||||||||||| Sbjct 60148241 CTTCTTAGAGTGACAAGCGACACACTTCAGTCGCACGAAATT-GAG-CAATAACAGGTCT 60148184 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||| | | | ||| ||| |||||||| |||| | |||| ||||| Sbjct 60148183 GTGATGCCCTTAGATATCCAGAGCCACACATGCGCTACAATGACGGGGCCAGTGAGTTTG 60148124 Query 188 TCACCTTGG-CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | | ||| ||| |||| |||| || | || | | |||||||| || || | | Sbjct 60148123 GAAACATGGCCCGAAAGGGTTGGGCAAATTGTTTCATCACTGTCGTGACTGGTATCGGGG 60148064 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||| ||||||| | | || ||||||| ||| |||| || ||||| ||| ||| | Sbjct 60148063 CTTGTAATTATTCCCCGCGAATGAGGAATTCCTGATAAGTGCAAGTCATAAGCTTGCGCT 60148004 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| || Sbjct 60148003 GATTACGTCCCTGCCCTTTTTA 60147982 Score = 127 bits (140), Expect = 4e-27 Identities = 159/214 (74%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 117 ATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGC 176 ||||||||||||||||| |||||||||| | |||| |||| |||||||| |||| | | Sbjct 41528977 ATAACAGGTCTGTGATGTCCTTAGATGTCCGAGGCCACACGTGCGCTACAATGACGGTAC 41529036 Query 177 CAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT-GC 234 || ||||| | |||| | || |||| |||| || || || | | | ||||| || Sbjct 41529037 CAGCGAGTCTGGAAACCTGGCCCAAAAGGGTTGGGAAAACTGTTTCATCACCGTCGTGGC 41529096 Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 |||| |||| ||||| ||||| | | | |||||||| | ||| ||||| || || | Sbjct 41529097 TGGGATCGGAGC-TTGCATTTATTCCCCGTGAACGAGGAGTTCCTGGTAAGTGCAGGTGA 41529155 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | | ||| ||||||||||||||| |||| || Sbjct 41529156 TAAACTTGCGCTGATTACGTCCCTGCTCTTTTTA 41529189 >seq34 Length=32115376 Score = 134 bits (148), Expect = 3e-29 Identities = 164/221 (74%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| ||||||||||||||||||||||||||||| | ||||| |||| | |||| | | Sbjct 17466199 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGGCCGGGGCCACACGTGTGCTATATT 17466257 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCT-GGGTAATCTTGTTAAACTCT 227 | | |||| ||| | | | ||||| ||| | | ||| || || || | | | Sbjct 17466258 AATGGTGCCAGCGATTCTGGAAACCTGGCCTGAAATTGTTGGGCAAACTGTTTCATCACC 17466317 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||||| ||||| | | ||||||||||| | | | |||||||||| ||| |||| | Sbjct 17466318 GTCGTGACTGGGATCGGGGCTTGCAATTATTCCCCGTAAACGAGGAATTCCTGGTAAATG 17466377 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || || ||| ||| ||||||||||||||||||||||| Sbjct 17466378 CAAGTGATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 17466418 >seq578 Length=36554 Score = 131 bits (144), Expect = 3e-28 Identities = 163/221 (74%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| ||||||||||| ||||| |||||||||||| | ||||| |||| |||||| | | Sbjct 13471 TTGAG-CAATAACAGGTTTGTGACGCCCTTAGATGTCCGGGGCCACACGTGCGCTATATT 13413 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCT-GGGTAATCTTGTTAAACTCT 227 || | |||| ||| | | | ||||| ||| || | ||| || || || | | | Sbjct 13412 AACGGTGCCAGCGATTATGGAAACCTGGCCCGAAAGTGTTGGGCAAACTGTTTCATCACC 13353 Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||||| ||||| | | ||||||||| | | | | |||||||| | ||| || | | Sbjct 13352 GTCGTGACTGGGATCGGGGCTTGCAATTAATCCCCGTGAACGAGGATTTCCTGGTTAATG 13293 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || || ||| ||| ||||||||||||||||||||||| Sbjct 13292 CAAGTGATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 13252 >seq660 Length=556124 Score = 95.1 bits (104), Expect = 2e-17 Identities = 152/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 || ||||||||||| |||| |||||| |||| | | ||| || | ||||||| |||| Sbjct 104919 GGTAATAACAGGTCACTGATACCCTTAAATGTCCGGAGCCACAAGTTCGCTACAATGACG 104860 Query 173 GAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 |||||||||| | | |||| | || |||| ||| || || || | | | |||| Sbjct 104859 TTGCCAACGAGTCTGAAAACCTGGACCAAAAGGGTTGGACAAACTGTTTCATCACCGTCG 104800 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 | || || | | ||||||||||| | | | |||||| ||| | |||| || | Sbjct 104799 TAACTGGAATGGGGGCTTGCAATTATTACCCATGAACGAGAAATTTATGTTAAGTGCAAG 104740 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || | | ||||| ||||||||||| |||||||| Sbjct 104739 TAATAAACTTGCGTTCTTTACGTCCCTGACCTTTGTA 104703 >seq564 Length=29324 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||||||||||||||||||||| | | || |||| |||||||| | Sbjct 4806 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGAGCTACACGTGCGCTACAAT 4864 Query 169 GACAGAGCCAACGAGT 184 || | |||| ||||| Sbjct 4865 AACGGTGCCAGCGAGT 4880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947191617280