Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq10665 109 6e-22
seq1136 93.3 4e-17
seq128 75.2 1e-11
>seq10665
Length=8850
Score = 109 bits (120), Expect = 6e-22
Identities = 132/176 (75%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTACCATG 70
||||||||||| ||||| ||| | ||||||||||||| ||| | ||| | | ||||
Sbjct 8758 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCGCCTGAAAATTCTTGCATG 8699
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| |||||||| | |||||||||||||| ||||| | ||| | |||||| |
Sbjct 8698 GAATAATGAAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGT 8641
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
|| | ||| || |||||| | |||| ||| | |||||||||||| ||||
Sbjct 8640 TAAGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTGGGAT 8585
>seq1136
Length=60186
Score = 93.3 bits (102), Expect = 4e-17
Identities = 129/177 (73%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTACCATG 70
||||||||||| ||||| ||| | ||||||||||||| ||| | ||| | | ||||
Sbjct 35256 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTGTGCGCCTGAAAATTCTTGCATG 35315
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| |||||||| | |||||||||||||| ||||| | ||| | |||||| |
Sbjct 35316 GAATAATGAAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAGTAATGGT 35373
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187
|| | || || |||| | ||| ||| | |||||||||||| |||||
Sbjct 35374 TAAGAGTGACAGACGGGAACATTTGTACGGCGGTGTTAGAGGTGAAATTCTGGGATT 35430
>seq128
Length=118216
Score = 75.2 bits (82), Expect = 1e-11
Identities = 78/100 (78%), Gaps = 3/100 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTA--CCATG 70
||||||||||| ||||| ||| | |||| |||| |||||| | | | |||| ||||
Sbjct 46332 TTTACTTTGAATAAATTTGAGTGCCCAAAACAGGACTTTGCGCCTAAAAATTATTGCATG 46273
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
||||||| ||||||| | | |||||||||||| |||||
Sbjct 46272 GAATAATGAGATAGGAC-TTCAGTTCTATTTTGTTGGTTT 46234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511884159200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |