Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq10665 190 4e-46
seq2921 190 4e-46
seq16921 178 2e-42
seq711 156 8e-36
seq9662 149 1e-33
seq1136 141 2e-31
seq5378 136 7e-30
seq1733 122 2e-25
seq6421 120 6e-25
seq2456 114 2e-23
seq781 114 2e-23
seq9275 84.2 4e-14
seq235 77.0 6e-12
>seq10665
Length=8850
Score = 190 bits (210), Expect = 4e-46
Identities = 202/262 (77%), Gaps = 7/262 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
|||||||||||||| | |||| || || || ||| || ||| |||||||||||||
Sbjct 8054 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 7997
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186
||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| |
Sbjct 7996 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 7937
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
|||| | ||| |||| |||| || || || | | | |||||| ||||| | |
Sbjct 7936 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 7877
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| |
Sbjct 7876 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 7817
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||
Sbjct 7816 GATTACGTCCCTGCCCTTTGTA 7795
>seq2921
Length=35972
Score = 190 bits (210), Expect = 4e-46
Identities = 202/262 (77%), Gaps = 7/262 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
|||||||||||||| | |||| || || || ||| || ||| |||||||||||||
Sbjct 21559 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 21616
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186
||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| |
Sbjct 21617 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 21676
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
|||| | ||| |||| |||| || || || | | | |||||| ||||| | |
Sbjct 21677 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 21736
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| |
Sbjct 21737 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 21796
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||
Sbjct 21797 GATTACGTCCCTGCCCTTTGTA 21818
Score = 187 bits (206), Expect = 5e-45
Identities = 201/262 (77%), Gaps = 7/262 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
|||||||||| ||| | |||| || || || ||| || ||| |||||||||||||
Sbjct 20515 CTTCTTAGAGAGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 20572
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186
||||||||||||||||| | ||||| |||| |||||||| |||| | |||| ||||| |
Sbjct 20573 GTGATGCCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTG 20632
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
|||| | ||| |||| |||| || || || | | | |||||| ||||| | |
Sbjct 20633 GAAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 20692
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| |
Sbjct 20693 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 20752
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||
Sbjct 20753 GATTACGTCCCTGCCCTTTGTA 20774
>seq16921
Length=2467
Score = 178 bits (196), Expect = 2e-42
Identities = 199/262 (76%), Gaps = 7/262 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
|||||||||||||| | |||| || || || ||| || ||| |||||||||||||
Sbjct 994 CTTCTTAGAGGGACAAGCGGCACACTTAAGTCGCACGAAATT-GAG-CAATAACAGGTCT 937
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186
||||||||||||||||| | | ||| |||| |||||||| ||| | |||| ||||| |
Sbjct 936 GTGATGCCCTTAGATGTCCGGAGCCACACGTGCGCTACAATGATGGTGCCAGCGAGTCTG 877
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
|||| | ||| |||| || | || || || | | | |||||| ||||| | |
Sbjct 876 GAAACCTGGCCCGAAAGGGTTGCGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 817
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| |
Sbjct 816 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 757
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||
Sbjct 756 GATTACGTCCCTGCCCTTTGTA 735
>seq711
Length=71778
Score = 156 bits (172), Expect = 8e-36
Identities = 168/217 (77%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||| ||||||||||||| | ||| | |||| |||||||| |||| |
Sbjct 5819 GCAATAACAGGTCTGTG-TGCCCTTAGATGTCCGGGGTCACACGTGCGCTACAATGACGG 5877
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGT 232
|||| ||||| | | ||||| ||| || ||||| || || || | | | |||||
Sbjct 5878 TGCCAGCGAGTCTGGGAACCTGGCCTGAAAGGGCTGGGCAAACTGTTTTATCACCGTCGT 5937
Query 233 GCTGGGGAT-AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291
| ||||| || || |||| |||| | | | | |||||||||| ||| ||||| || |
Sbjct 5938 GACTGGGATCAGGGC-TTGCGATTAATCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAG 5996
Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||| ||| |||||||||||||||||||||||
Sbjct 5997 TCATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 6033
>seq9662
Length=10629
Score = 149 bits (164), Expect = 1e-33
Identities = 167/221 (76%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| || |||||||||||| |||||||||||||| | ||||| |||| |||||||| |
Sbjct 2125 TTGAG-CAGTAACAGGTCTGTTATGCCCTTAGATGTCCAGGGCCACACGTGCGCTACAAT 2183
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | |||| ||||| | |||| | ||| ||| |||| || || || | | |
Sbjct 2184 GACGGTGCCAGCGAGTCTGGAAACCTGGCCCGAAAGTGTTGGGCAAACTGTTTCATCACC 2243
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
|||||| ||||| | | ||| ||||||| | | | |||||||||| ||| ||||| |
Sbjct 2244 GTCGTGACTGGGATCGGGGCTTGTAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTG 2303
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| | | |||||||||||| | ||||||||
Sbjct 2304 CAAGTCATAAGCTTGAGCTGATTACGTCCCAGTCCTTTGTA 2344
>seq1136
Length=60186
Score = 141 bits (156), Expect = 2e-31
Identities = 164/221 (74%), Gaps = 14/221 (6%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| |||||||||||||||||||||||||||||| | ||||| || | |||||||| |
Sbjct 35986 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCACAAGTGCGCTACAAT 36044
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | |||| ||||| | |||| | || |||| |||| || || | | | |
Sbjct 36045 GACGGTGCCAGCGAGTCTGGAAACCTGGCTCGAAAGGGTTGGGCAAACTGTATCATCACC 36104
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||||| | ||||||||||| | | | ||||||| || ||||||||| |
Sbjct 36105 GTCGT------------GACTTGCAATTATTCCCCGTGAACGAGGGATTCCTAGTAAGTG 36152
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| |||||||||||||||||||||||
Sbjct 36153 CAAGTCATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 36193
>seq5378
Length=22061
Score = 136 bits (150), Expect = 7e-30
Identities = 149/197 (76%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCAC 191
|||||||||||| | || || |||| |||||||| |||| | |||| ||||| | ||
Sbjct 14963 GCCCTTAGATGTCCGGGACCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTGGAAAC 14904
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|| | ||| |||| |||| || || || | | | |||||| | ||||| | | ||||
Sbjct 14903 CTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGATTGGGATCGGGGCTTGC 14844
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
||||||| | | |||||||||| ||| ||||| || ||||| ||| ||| ||||||
Sbjct 14843 AATTATTCCCTGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCTGATTA 14784
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||| ||||||
Sbjct 14783 CGTCCCTGCCGTTTGTA 14767
>seq1733
Length=48839
Score = 122 bits (134), Expect = 2e-25
Identities = 143/192 (74%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196
||||||| | ||||| |||| |||||||| |||| | |||| ||||| | |||| |
Sbjct 27904 TAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTCTGGAAACCTGGC 27963
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| |||| |||| || || || | | | |||||| ||||| | | |||||||||
Sbjct 27964 CCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGGCTTGCAATTA 28023
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
|| | | | |||||||||| ||| || || || ||||| ||| ||| |||||| |||
Sbjct 28024 TTCCCCGTGAACGAGGAATTCCTGGTGAGTGCAAGTCATAAGCTTGCGCTGATTATATCC 28083
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 28084 CTGCCCTTTGTA 28095
>seq6421
Length=18482
Score = 120 bits (132), Expect = 6e-25
Identities = 159/217 (73%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||||||| |||||| || | ||||| || |||||||| |||| |
Sbjct 2374 GCAATAACAGGTCTGTGATGCTCTTAGACGTCCGGGGCCACATATGCGCTACAATGACGG 2433
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGT-CTGGGTAATCTTGTTAAACTCTGTCGT 232
||||| |||| | | ||||| |||| | ||| || || || | | | ||||
Sbjct 2434 TGCCAATGAGTCTGGAAACCTGGCCCGAAGATGTTGGCCAAACTGTTTCATCACCATCGT 2493
Query 233 G-CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291
| ||||| | || ||||||||| | | | |||||||||| ||| || || || |
Sbjct 2494 GACTGGGCTCATGGC-CCGCAATTATTCCCCGTGAACGAGGAATTCCTGGTCAGTGCAAG 2552
Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||| || |||||||||||||| ||||||||
Sbjct 2553 TCATAAGCTTGCACTGATTACGTCCCTGTCCTTTGTA 2589
>seq2456
Length=40044
Score = 114 bits (126), Expect = 2e-23
Identities = 186/263 (71%), Gaps = 16/263 (6%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC----TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
|||||||||||||| | || | | ||| | ||| || | |||||||| |||||
Sbjct 22118 CTTCTTAGAGGGACAAGCGTCATGTTTAAGTGGCACGAAATTGG--GCAATAACGGGTCT 22061
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186
||||||||||||||||| ||| | |||| |||||||| |||| | |||||||||| |
Sbjct 22060 GTGATGCCCTTAGATGTCTGGGGACACACGTGCGCTACAATGACGGTGCCAACGAGTCTG 22001
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT-GCTGGGGATAGAG 245
|||| |||||| |||| |||| || || || | | |||| ||||||
Sbjct 22000 GACACC-TGGCCGAAAGGGTTGGGCAAACTGTTTCATCAAGTTCGTAACTGGGG------ 21948
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
||| ||||| | | | | || |||||| || |||| || |||| ||| |||
Sbjct 21947 -TTTGTAATTAATCCCCGTGAATGAGGAACTACTGGTAAATGCAATTCATAAGCTTGCGC 21889
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
|||||| ||||||||||||| ||
Sbjct 21888 TGATTATGTCCCTGCCCTTTTTA 21866
>seq781
Length=69496
Score = 114 bits (126), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| |||||||| |||||| ||||| ||| |||| | ||||| |||| |||||||| |
Sbjct 63088 TTGAG-CAATAACATGTCTGTCATGCCATTATATGTCCAGGGCCACACGTGCGCTACAAT 63030
Query 169 GACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | | |||||||| | |||| | ||| |||| |||| || | || | | |
Sbjct 63029 GACGGTGTCAACGAGTCTGGGAACCTGGCCCGAAAGGGTTGGGCAAATTGTTTCATCACA 62970
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
|||||| ||||| | | ||||||||||| | | | ||||| ||| | | ||||| |
Sbjct 62969 GTCGTGACTGGGATCGGGACTTGCAATTATTCCCCATGAACGAAAAATTCGTGGTAAGTG 62910
Query 288 CGTGTCATCAGCA-CGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| | || | ||||| ||||||| |||||| ||
Sbjct 62909 CAAGTCATAAACATTGATCTGATTCCGTCCCTACCCTTTATA 62868
>seq9275
Length=11409
Score = 84.2 bits (92), Expect = 4e-14
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
|||| | || |||| |||| || || || | | | |||||| | || | | ||
Sbjct 2549 ACCTGGCCCAAAAGGGTTGGGAAAACTGTTTCATCACCGTCGTGACTAGTATCGGGGCTT 2490
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| ||||
Sbjct 2489 GCAATTATTTCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCTGAT 2430
Query 310 TACGTCCCTGCCCTTTGTA 328
||| |||||||||||||||
Sbjct 2429 TACATCCCTGCCCTTTGTA 2411
>seq235
Length=100731
Score = 77.0 bits (84), Expect = 6e-12
Identities = 156/224 (70%), Gaps = 7/224 (3%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTG-GGCCGCACGCGCGCTACAC 167
||||| |||||| | ||| ||||||||||||||||| | | | || |||| ||||||||
Sbjct 46225 TTGAG-CAATAAAAAGTCCGTGATGCCCTTAGATGTCCAGTGACCACACGTGCGCTACAA 46283
Query 168 TGACAGAGCCAACGAGTTCATCACCTTGGCCGG--AAGGTCTGGGTAATCTTGTTAAACT 225
|||| |||| ||||| | || || | ||||| | || || || || | |
Sbjct 46284 CAACAGTGCCAGTGAGTTTGGAAATCTGACCTGAAAAGGT-TTGGCAAACTGTTTTATCA 46342
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCT-TCAACGAGGAATGCCTAGTAA 284
|||||| ||||| || ||||||||||| |||| | |||||| || || |||
Sbjct 46343 TCGTCGTGACTGGGATCAAGACTTGCAATTATT-CTCTATGAACGAGATATTCCAGATAA 46401
Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| || |||| ||| | | ||| | ||||||| |||||||
Sbjct 46402 GTGCAAATCATAAGCTTCAGCTAATTCCATCCCTGCTCTTTGTA 46445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946978781440
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