Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq17028 179 4e-43 >seq17028 Length=5425 Score = 179 bits (198), Expect = 4e-43 Identities = 107/112 (96%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 3960 GGTCGCAGTAACCAGGCCGCTGCGACTGTTTATCAAAAACACAGCACTCTGCAAACACGA 4019 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 4020 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGAAGGTTAATTGATG 4071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605683289