Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq17028 187 5e-45 >seq17028 Length=5425 Score = 187 bits (206), Expect = 5e-45 Identities = 227/306 (74%), Gaps = 19/306 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 627 GCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 568 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| |||||| | ||| |||||||| || ||||| |||||||| Sbjct 567 GGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACGGATCGTCGC 508 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||||||| ||| | | ||||||| |||||| | | || || || | || Sbjct 507 CTTGGTGGGCCTTTACCCCGCCAACTAGCTAATCCGACATCGGCTCA--TTCAATCGCGC 450 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGAC--------ATTATGCGGTATTAGCGT 238 || |||| ||| ||| || | || | || |||||||||||||||| Sbjct 449 AA-----GGTC--CGAA-GATCCCCTGCTTTCACCCGTAGGTCGTATGCGGTATTAGCGT 398 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 |||||| ||||||| || | | ||| | || || | | || || ||||||||||| Sbjct 397 AAGTTTCCCTACGTTATCCCCCACGAAAAAGTAGATT-CCGATGTATTCCTCACCCGTCC 339 Query 299 GCCACT 304 |||||| Sbjct 338 GCCACT 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997979983104