Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq17028 159 3e-37 >seq17028 Length=5425 Score = 159 bits (176), Expect = 3e-37 Identities = 129/156 (83%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| | ||| |||| ||||| Sbjct 4671 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGTCCTAGTTTCCTACCTG 4612 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || || ||||| ||| |||||||||| ||||||||| |||||| | | ||||||| Sbjct 4611 CTTGATCCGTCGATCTTGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTC 4552 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | | ||| ||||||| |||||||||||| Sbjct 4551 CGACCGCGCTGAGCGTACCTTCGAGCTCCTCCGTTA 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473406987428