Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12]
42,069 sequences; 343,294,136 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq17028 203 7e-50
>seq17028
Length=5425
Score = 203 bits (224), Expect = 7e-50
Identities = 219/288 (76%), Gaps = 13/288 (5%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCA--CAC 58
||||||||||||| ||||||||| ||||||||| | ||||| || ||||| ||
Sbjct 758 GGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCTTTGGGTACCGTCA---TCCCAACCAG 702
Query 59 GT-------GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111
|| || || ||| || || | ||||| ||||||| ||| || ||||| |
Sbjct 701 GTATTAGCCGGCTGGATTTCTTTCCCAACAAAAGGGCTTTACAACCCGAAGG-CCTTCTT 643
Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171
| ||||| ||||||| |||| || || |||||| |||||||||| |||||||||
Sbjct 642 CACCCACGCGGTATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGC 583
Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231
||||||||||||| |||||||||||||||||||| ||||| || | |||||||||| |
Sbjct 582 CTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCA 523
Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
||| ||||| | || |||||||| |||||||||| |||| |||||
Sbjct 522 GCTACGGATCGTCGCCTTGGTGGGCCTTTACCCCGCCAACTAGCTAAT 475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068350366528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |