Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20rodhaini_20[genbank_20GCA_5F000951475.1_202014-10-12] 42,069 sequences; 343,294,136 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq11890 77.0 5e-12 >seq11890 Length=9003 Score = 77.0 bits (84), Expect = 5e-12 Identities = 89/115 (77%), Gaps = 4/115 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAG- 59 |||| ||||||||||| | |||||| |||||||| | | | ||| || |||| | Sbjct 6801 GTACAAGAGGAACCGCAGG-TTCAGA-TAATTGGTATACGTGCCTGGTCGAA-AGGCCGA 6857 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||||||||||||| ||||| | ||||||||||||| ||| |||||| Sbjct 6858 TGTTGCGAAGCTACCATCTGAAGGATTCAGACTGAACGCCTCTATGTCTGAATCC 6912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818866140416