Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq5719 93.3 5e-17 seq4661 93.3 5e-17 seq846 93.3 5e-17 seq12211 87.8 2e-15 seq8436 87.8 2e-15 seq11126 84.2 3e-14 seq8081 84.2 3e-14 seq3859 84.2 3e-14 seq1946 84.2 3e-14 seq5812 78.8 1e-12 seq12402 77.0 4e-12 seq8816 77.0 4e-12 seq4982 75.2 1e-11 >seq5719 Length=114575 Score = 93.3 bits (102), Expect = 5e-17 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| | ||| | ||| Sbjct 66982 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAACAATATACAAGCG 66924 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 66923 TAAGCCTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 66886 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/98 (78%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | ||| |||| ||||||||||||| | ||| | || Sbjct 63632 AAACCAACAAAATAAA-ACCAAAGTCTTATTTTATTATTCCATGCAACAATATACAAACG 63574 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||| |||| | ||||||||||| |||| ||||| Sbjct 63573 TAAGCCTTCTTTAAGTACTCTAATTTTTTCAAAGTAAA 63536 >seq4661 Length=13332 Score = 93.3 bits (102), Expect = 5e-17 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| | ||| | ||| Sbjct 13210 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAACAATATACAAGCG 13152 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| ||||||||||| || |||| ||||| Sbjct 13151 TAAGCCTGCTTTAAACACTCTAATGTTTTCAAAGTAAA 13114 >seq846 Length=108961 Score = 93.3 bits (102), Expect = 5e-17 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| | ||| | ||| Sbjct 73346 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAACAATATACAAGCG 73288 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 73287 TAAGCCTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 73250 >seq12211 Length=39292 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | ||| |||| ||||||||||||| | ||| | ||| Sbjct 32366 AAACCAACAAAATAAA-ACCAAAGTCTTATTTTATTATTCCATGCAATAATATACAAGCG 32308 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 32307 TAAGCCTGCTTTAAGCACTCTAATTTTATCAAAGTAAA 32270 Score = 82.4 bits (90), Expect = 9e-14 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAA 92 |||||||| ||||||||||||| | ||| | ||||||||||||||| | |||||||| Sbjct 31942 GTCCTATTTTATTATTCCATGCAACAATATACAAGCGTAAGCCTGCTTTAAGCACTCTAA 31883 Query 93 TTTTCTCAAGGTAAA 107 |||| |||| ||||| Sbjct 31882 TTTTTTCAAAGTAAA 31868 >seq8436 Length=51388 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| || ||| | ||| Sbjct 38727 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAAAAATATACAAGCG 38785 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||| ||||||| | |||||||||||| | || ||||| Sbjct 38786 TAAGTCTGCTTTAAGCACTCTAATTTTTTGAAAGTAAA 38823 Score = 87.8 bits (96), Expect = 2e-15 Identities = 79/98 (81%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| || ||| | ||| Sbjct 43032 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAAAAATATACAAGCG 43090 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||| ||||||| | |||||||||||| | || ||||| Sbjct 43091 TAAGTCTGCTTTAAGCACTCTAATTTTTTGAAAGTAAA 43128 >seq11126 Length=44407 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| |||| |||||||| | ||| | ||| Sbjct 32832 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATT-TTCCATGCAACAATATACAAGCG 32889 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 32890 TAAGCCTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 32927 Score = 82.4 bits (90), Expect = 9e-14 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAA 92 |||||||| ||||||||||||| | ||| | ||||||||||||||| | |||||||| Sbjct 33346 GTCCTATTTTATTATTCCATGCAACAATATACAAGCGTAAGCCTGCTTTAAGCACTCTAA 33405 Query 93 TTTTCTCAAGGTAAA 107 |||| |||| ||||| Sbjct 33406 TTTTTTCAAAGTAAA 33420 >seq8081 Length=97983 Score = 84.2 bits (92), Expect = 3e-14 Identities = 78/98 (80%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| | ||| | ||| Sbjct 45807 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAACAATATACAAGCG 45865 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | ||||||||| || || | ||||| Sbjct 45866 TAAGCCTGCTTTAAGCACTCTAATATTTTCTATGTAAA 45903 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/98 (78%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| |||| ||||||| | ||| | ||| Sbjct 43583 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTGTTCCATGTAACAATATACAAGCG 43641 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | ||||||||| || || | ||||| Sbjct 43642 TAAGCCTGCTTTAAGCACTCTAATATTTTCTATGTAAA 43679 >seq3859 Length=131801 Score = 84.2 bits (92), Expect = 3e-14 Identities = 78/98 (80%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||| | || | |||||||| ||||||||||||| | ||| | || Sbjct 105764 AAACCAACAAAAAAAAACCGAA-GTCCTATTTTATTATTCCATGCAACAATATACAAACG 105706 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 105705 TAAGCCTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 105668 >seq1946 Length=619270 Score = 84.2 bits (92), Expect = 3e-14 Identities = 75/93 (81%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 15 AACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGC 74 ||||||||| || | |||||||| ||||||||||||| | ||| | |||||||| Sbjct 12504 AACAAAATAAAACCGAA-GTCCTATTTTATTATTCCATGCAACAATATACAAGCGTAAGC 12562 Query 75 CTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||| | |||||||||||| |||| ||||| Sbjct 12563 CTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 12595 >seq5812 Length=62756 Score = 78.8 bits (86), Expect = 1e-12 Identities = 77/98 (79%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||| ||| | | ||| | | | Sbjct 59653 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTTCATACAACAATATACAAGAG 59711 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 59712 TAAGCCTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 59749 >seq12402 Length=44341 Score = 77.0 bits (84), Expect = 4e-12 Identities = 70/87 (80%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| | ||| | || Sbjct 44057 AAACCAACAAAATAAA-ACTAAAGTCCTATTTTATTATTCCATGCAACAATATACAAACG 44115 Query 70 TAAGCCTGCTTTGAACACTCTAATTTT 96 |||||||||||| | |||||||||||| Sbjct 44116 TAAGCCTGCTTTAAGCACTCTAATTTT 44142 >seq8816 Length=112347 Score = 77.0 bits (84), Expect = 4e-12 Identities = 73/92 (79%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | |||||||| ||||||||||||| || ||| | ||| Sbjct 5201 AAACCAACAAAATAAA-ACCAAAGTCCTATTTTATTATTCCATGCAAAAATATACAAGCG 5143 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAA 101 ||| | |||||| | ||||||||||| |||| Sbjct 5142 TAATCATGCTTTAAGTACTCTAATTTTTTCAA 5111 >seq4982 Length=64141 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/98 (78%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| || | ||| | || ||||||| ||||| | ||| ||| Sbjct 53592 AAACCAACAAAATAAAACCGAA-GTCATGTTTTATTATTTCATGCAACAATATAGAAGCG 53650 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||| | |||||||||||| |||| ||||| Sbjct 53651 TAAGCCTGCTTTAAGCACTCTAATTTTTTCAAAGTAAA 53688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595126298988