Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schmidtea_20mediterranea_20[genbank_20GCA_5F000691995.1_202014-05- 30] 12,782 sequences; 700,725,851 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq6794 212 2e-50 >seq6794 Length=1050243 Score = 212 bits (234), Expect = 2e-50 Identities = 297/414 (72%), Gaps = 2/414 (0%) Strand=Plus/Minus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAA 2577 |||||||||||||||| || |||||||| |||| |||| |||| |||| || |||||| Sbjct 488650 AAATACCCAATCATCAGCATTGAAGATGGAATGGCCGAAGACGATTGGGCTGGCTGGAAA 488591 Query 2578 TCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACT 2637 | || || || || | ||| |||| ||||| | || ||||| || || || || || Sbjct 488590 ACGCTCACAGAGCGCATCGGTTCTAAAATTCAACTTGTCGGTGATGATTTATTTGTCACC 488531 Query 2638 AACACTGCTTACCTTG-AAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAA 2696 ||||| | | ||| || |||| |||||| | || ||| || || || | ||||| Sbjct 488530 AACAC-GAAAATTTTGCAAGAAGGCATTGCAAAGGGCGTTGCAAATTCCATTTTGATCAA 488472 Query 2697 AGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGC 2756 | | || || || || || || |||||||| |||| || || |||||||| ||| || Sbjct 488471 AATCAATCAGATTGGAACATTAACTGAAACATTTGCTGCGATTGAAATGGCAAAACGTGC 488412 Query 2757 TGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGA 2816 ||| || ||| | || | || || ||||| |||||||| || || || || || Sbjct 488411 TGGTTATACATCGGTCATTAGTCATCGCTCAGGCGAAACTGAGGACAGCACCATTGCCGA 488352 Query 2817 TATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCG 2876 ||| || || || || || ||||| |||||||| || || ||| | || ||||||| Sbjct 488351 TATCGCTGTGGCCACGAATGCTGGGCAAATTAAAACGGGATCACTAAGTCGCTCTGACCG 488292 Query 2877 TATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGC 2930 ||| |||||||| || |||||||| || || ||||| | | ||||| ||||| Sbjct 488291 TATGGCTAAATATAATCAATTGCTGCGAATTGAAGAAGATTTGGGTGATGTTGC 488238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156014715516408