Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq194346 116 6e-24
>seq194346
Length=1844
Score = 116 bits (128), Expect = 6e-24
Identities = 158/213 (74%), Gaps = 12/213 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||| || ||||||| ||| ||| ||| | |||||| || ||||||||||||| |
Sbjct 207 GTACAAAGGACATGGACGTAATCAGCGCAAGCGT-ATGACTTGCACTTACTAGGAATT-C 150
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCC---CATCACGATGAAATTTCAAAGA 117
|||||| | | ||||||| ||| | |||| ||| ||| ||| | | ||
Sbjct 149 CTCGTTCACGGGGAACAATTCCAAGCCCCGATCCTTGTCATGACGGTGAC--TGCCCAGT 92
Query 118 TTACCCGGACCTGTCG-GCCA--AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGC 174
|| ||| ||| | | |||| |||| | ||||||||| | ||| ||| ||||||
Sbjct 91 TTGCCCAACCCTTTAGAGCCAGAAGGTCA--GACTCGTTGGCACCGTCATTGTGGCGCGC 34
Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207
||||||||| | |||||||||||||||||||||
Sbjct 33 GTGCGGCCCCGGACATCTAAGGGCATCACAGAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 748485745140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |