Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq194346 116 6e-24 >seq194346 Length=1844 Score = 116 bits (128), Expect = 6e-24 Identities = 158/213 (74%), Gaps = 12/213 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| || ||||||| ||| ||| ||| | |||||| || ||||||||||||| | Sbjct 207 GTACAAAGGACATGGACGTAATCAGCGCAAGCGT-ATGACTTGCACTTACTAGGAATT-C 150 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCC---CATCACGATGAAATTTCAAAGA 117 |||||| | | ||||||| ||| | |||| ||| ||| ||| | | || Sbjct 149 CTCGTTCACGGGGAACAATTCCAAGCCCCGATCCTTGTCATGACGGTGAC--TGCCCAGT 92 Query 118 TTACCCGGACCTGTCG-GCCA--AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGC 174 || ||| ||| | | |||| |||| | ||||||||| | ||| ||| |||||| Sbjct 91 TTGCCCAACCCTTTAGAGCCAGAAGGTCA--GACTCGTTGGCACCGTCATTGTGGCGCGC 34 Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207 ||||||||| | ||||||||||||||||||||| Sbjct 33 GTGCGGCCCCGGACATCTAAGGGCATCACAGAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 748485745140