Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq24304 105 1e-20
seq11251 87.8 3e-15
>seq24304
Length=8687
Score = 105 bits (116), Expect = 1e-20
Identities = 178/252 (71%), Gaps = 7/252 (3%)
Strand=Plus/Plus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAG 127
|| ||||||||||| ||||| || || |||| ||| || || | ||| | || |
Sbjct 938 ACGTTTACTTTGAACAAATTTGAATGCTCAAGCCAGCCCGATGTTGTCTGAAAAGTTTTG 997
Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAA 186
|||| |||||| ||||||||| | ||||||||||| ||| |||| | ||| ||| ||||
Sbjct 998 CATGAAATAATGGAATAGGACTT-CGGTTCTATTTCGTTAGTTT-TCGGATCCGAAGTAA 1055
Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246
|||| || || ||||| || | || || | | ||||||||||||| ||||
Sbjct 1056 TGATCAAAAGAGATAGGGGGAGACGTTTGTCTGGTTGCGCTAGAGGTGAAATTCATGGAC 1115
Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306
|||| | ||| |||||||| ||| |||| |||| |||||| || ||| |
Sbjct 1116 CGTAACCAGACAAGCTAAAGCGAAAGCATTCGTCAAGCATGTATTCATTGGCCA-TGAGC 1174
Query 307 GAAAGTTAGGGG 318
|||||| || ||
Sbjct 1175 GAAAGTCAGAGG 1186
>seq11251
Length=11880
Score = 87.8 bits (96), Expect = 3e-15
Identities = 106/140 (76%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCT---CGAATACATTAG 127
|| ||||||||||| ||||| || || ||||| || ||| |||| ||| | || |
Sbjct 2847 ACGTTTACTTTGAACAAATTTGAATGCTCAAACCACGCCGATGCTGCCTGAAAAGTTTTG 2906
Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAA 186
||||||||||| |||||||| | ||||||||||| | |||||| | | | ||| ||||
Sbjct 2907 CATGGAATAATGAAATAGGAC-TTCGGTTCTATTTCGCTGGTTT-TCGAATCCGAAGTAA 2964
Query 187 TGATTAATAGGGATAGTCGG 206
|||| || | ||||| |||
Sbjct 2965 TGATCAAAATAGATAGGCGG 2984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 910785111808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |