Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4008 143 1e-31 seq12471 138 5e-30 seq125024 127 8e-27 seq211858 125 3e-26 seq86850 125 3e-26 seq63686 125 3e-26 seq4674 113 2e-22 seq4010 95.1 5e-17 seq8125 78.8 4e-12 >seq4008 Length=16651 Score = 143 bits (158), Expect = 1e-31 Identities = 100/114 (88%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||| ||||||||||||||||||| || |||| | |||||||||||||||||||||||| Sbjct 9087 GACCTGAAAGATGGTGAACTATGCATGCGTAGGTTTAAGCCAGAGGAAACTCTGGTGGAG 9146 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||| ||||| |||||||||||||||||||| | |||||||||||| Sbjct 9147 GACCGCAGCGATTCTGACGTGCAAATCGATCGTCAAACGCGAGTATAGGGGCGA 9200 >seq12471 Length=11434 Score = 138 bits (152), Expect = 5e-30 Identities = 97/111 (87%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||| ||||||||||||||| || |||| |||||||||||||||||||| ||||| Sbjct 6175 GACCCGAAGGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAGGAAACTCTGATGGAG 6116 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 | ||||||| ||||| |||||||||||||||||||| || |||| |||| Sbjct 6115 GACCGCAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTATGGGGG 6065 >seq125024 Length=3003 Score = 127 bits (140), Expect = 8e-27 Identities = 94/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||| | ||| || ||| ||||||||||||||||||||||||||| Sbjct 694 ACCCGAAAGATGGTGAAATTTGCTTGCGTAGATTGAAGCCAGAGGAAACTCTGGTGGAGG 635 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||| ||||| |||| ||||||||||||||| | ||||||||| Sbjct 634 ACCGCAGCGATTCTGACGTGAAAATCGATCGTCAAAAGCGAGTATAGGGG 585 >seq211858 Length=1650 Score = 125 bits (138), Expect = 3e-26 Identities = 92/107 (86%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCA 636 ||||||||||||||||| || |||| |||||||||||||||| |||||||||| ||| Sbjct 791 AAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAGGAAACCCTGGTGGAGGACGGCA 850 Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||| |||| ||||||||||||||| | |||||||||||| Sbjct 851 GCGATTCTGACGTGTAAATCGATCGTCAAACGCGAGTATAGGGGCGA 897 >seq86850 Length=4116 Score = 125 bits (138), Expect = 3e-26 Identities = 84/94 (89%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| Sbjct 1575 ACCCGAAAGATGGTGAACTATGCTTGCGTAGATTGAAGCCAGAGGAAACTCTGGTGGAGG 1634 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 ||||||| ||||| |||| ||||||||||||| Sbjct 1635 ACCGCAGCGATTCTGACGTGAAAATCGATCGTCA 1668 >seq63686 Length=5136 Score = 125 bits (138), Expect = 3e-26 Identities = 90/104 (87%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 ||||| |||||||| | |||| ||||||||||||||||||||||||||| ||||||| Sbjct 4000 ATGGTTAACTATGCTTTCGTAGGTTGAAGCCAGAGGAAACTCTGGTGGAGGACCGCAGCG 3941 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| |||||||||||||||||||| | |||||||||||| Sbjct 3940 ATTCTGACGTGCAAATCGATCGTCAAACGCGAGTATAGGGGCGA 3897 >seq4674 Length=15944 Score = 113 bits (124), Expect = 2e-22 Identities = 91/111 (82%), Gaps = 7/111 (6%) Strand=Plus/Minus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||| |||||||||| || |||| ||| ||||||||||||||||| Sbjct 4444 ACCCGAAAGATGATGAACTATGCTTGCGTAGGTTGA-------GGAAACTCTGGTGGAGG 4392 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||| ||||| |||| ||||||||||||||| || |||||||||| Sbjct 4391 ACCGCAGCGATTCTGACGTGAAAATCGATCGTCAAACGTGAGTATAGGGGC 4341 >seq4010 Length=16650 Score = 95.1 bits (104), Expect = 5e-17 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||||||| |||| ||||||| | || | || |||||||||||||| |||| | |||| Sbjct 13769 GACCCGAAACATGGAGAACTATTCTTGCGTTGGTTGAAGCCAGAGGAACCTCTAGCGGAG 13828 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 | |||| || ||||| |||||| ||||||| ||||| || ||| ||| Sbjct 13829 GGCCGCATCGATTCTGACGTGCAGATCGATCCTCAAACGTGAATATTGGG 13878 >seq8125 Length=13359 Score = 78.8 bits (86), Expect = 4e-12 Identities = 84/111 (76%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||||| | |||||||||||||| | |||| | || |||||||||||| || ||||| Sbjct 5791 GACCCGAGATATGGTGAACTATGCTGGCGTAGGCTAAAACCAGAGGAAACTGTGATGGAG 5850 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 | | | || ||||| |||| | |||||| ||| | | ||||||||| Sbjct 5851 GACTGTAACGATTCTGACGTGTTAGTCGATCTTCAGACGTAAGTATAGGGG 5901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2069652605800