Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20asiatica_20[genbank_20GCA_5F001693035.2_202016-09-02] 6,900 sequences; 168,679,183 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq283 136 7e-30 seq127 111 3e-22 >seq283 Length=89750 Score = 136 bits (150), Expect = 7e-30 Identities = 185/252 (73%), Gaps = 7/252 (3%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAG 127 || ||||||||||| ||||| ||||| ||||| |||||| |||| ||| | || | Sbjct 60473 ACGTTTACTTTGAACAAATTTGAGTGCTCAAATCAGGCCGATGTTGCCTGAAAAGTTTTG 60414 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAA 186 ||||||||||| ||||||||| | ||| ||||||| |||||||| | ||| ||| |||| Sbjct 60413 CATGGAATAATGGAATAGGAC-TTCGGCTCTATTTCGTTGGTTT-TGGGATCCGAAGTAA 60356 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| || || || | ||||| || |||| | ||||||||||||| |||| Sbjct 60355 TGATCAAAAGAGACGGGCGGGGACGTTTGTATGGCTGCGCTAGAGGTGAAATTCATGGAC 60296 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| |||| |||||||| ||| |||| ||||||||||| || ||| | Sbjct 60295 CGTAGCCAGACAGACTAAAGCGAAAGCATTCGTCAAGCATGTTTTCATTGGCCA-TGAGC 60237 Query 307 GAAAGTTAGGGG 318 |||||| || || Sbjct 60236 GAAAGTCAGAGG 60225 >seq127 Length=247233 Score = 111 bits (122), Expect = 3e-22 Identities = 177/251 (71%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT---TTGCTCGAATACATTAG 127 || ||||||||||| |||| |||| ||||| |||||| |||| ||| | | Sbjct 153564 ACGTTTACTTTGAACAAATCTGAGTACTCAAATCAGGCCGATGTTGCCTGAAAAGTAATG 153505 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 ||||||||| | ||||||||| | ||||||||||||||||||| | || ||| ||| | Sbjct 153504 CATGGAATATTGGAATAGGAC-TCTGGTTCTATTTTGTTGGTTTTTGGGTCCGAAGTAGT 153446 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||| | | || || ||||| ||| ||| | |||||||||||||| |||| Sbjct 153445 GATCGAATGAGACAGGCGGGGATGTTTGTAAGGCTGCGCCAGAGGTGAAATTCATGGAAC 153386 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||| | || |||||||| ||| |||| |||| |||||| || ||| || Sbjct 153385 GTAGCCAGACAGAATAGAGCGAAAGCATTCGTCAAGCATGTCTTCATTGGCCA-TGAGCG 153327 Query 308 AAAGTTAGGGG 318 ||||| || || Sbjct 153326 AAAGTAAGAGG 153316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915136851200