Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23]
3,626 sequences; 169,104,283 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq148 147 3e-33
seq5 86.0 9e-15
>seq148
Length=170690
Score = 147 bits (162), Expect = 3e-33
Identities = 167/219 (76%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| | |||||||||||| |
Sbjct 138476 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTACACTTACTAGGAATC-C 138533
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | ||||||| ||| | ||||| |||||| | || | || ||
Sbjct 138534 CTCGTTCACGGGGAACAATTCCAAGCCCCGATCCCTGTCACGACGGTGATTGACCAGTTT 138593
Query 120 ACCCGGACCTGTCGGCCAAGGTGATA-GACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| | || | |||||| ||| | ||| ||||||||||||||
Sbjct 138594 GCCCAACCCTTTCGGGCCAGAAGGCCTGACTCGCTGACACCGTCATTGTAGCGCGCGTGC 138653
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||| | |||||||||||||||||||||||||||||||
Sbjct 138654 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 138692
>seq5
Length=2503511
Score = 86.0 bits (94), Expect = 9e-15
Identities = 139/196 (71%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||| ||||||| ||| | ||| |||||| || | ||||||| | |||
Sbjct 2490377 GTACAAAGGGCAGGGATGTAGTCAGCGCAAACTT-ATGACTTGCACCTACTAGGGAATTC 2490319
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT-GAAATTTCAAAGATT 119
|||||| | | || |||| ||| || ||||| ||||||| | ||| || ||
Sbjct 2490318 CTCGTTCACGGAGAAGAATTCCAAGCTTCGATCCCTGTCACGATGGTGATTGACCAGTTT 2490259
Query 120 ACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| | || | || | | ||||||| || | || ||||| ||||||||
Sbjct 2490258 GCCCAACCCTTTTGGGCCAGAAGGTCTGACTCGTATAAACCGTCGTTGTAGTGCGCGTGC 2490199
Query 179 GGCCCAGAACATCTAA 194
| || | ||||| ||
Sbjct 2490198 GACCGCGGACATCCAA 2490183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751973584590
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |