Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq148 161 2e-37 seq282 113 7e-23 >seq148 Length=170690 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| | |||||||||||||||||||||||||||||||||| |||||||| Sbjct 139078 CTAATTAGCAGGCTGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 139137 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct 139138 ACTAAGAACGGCCATGCACCACCAACCACCAAATCAAGAAAGAGCTCTCAATCTGTC 139194 Score = 102 bits (112), Expect = 1e-19 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | |||||| ||||||||||||||||||| | |||||||||||||||||||| Sbjct 138622 ACTCGCTGACACCGTCATTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGA 138681 Query 62 CCTGTTATTGC 72 ||||||||||| Sbjct 138682 CCTGTTATTGC 138692 >seq282 Length=94535 Score = 113 bits (124), Expect = 7e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| | ||||||||||||||||||||| | | ||||| ||| |||||||| Sbjct 7906 CTAATTAGCAGGCTGCGGTCTCGTTCGTTATCGGAATCAGCTAGACAGATCGCTCCACCA 7965 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| ||||||||| ||||| ||| |||||||||| |||| | | ||||| Sbjct 7966 GCTAAGAGCGGCCATGCCCCACCGACCACCAAATCAAGAAAAAGCTCGCGACCTGTC 8022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796772010906