Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq12 221 2e-55 seq7 208 1e-51 seq5 113 8e-23 >seq12 Length=1725783 Score = 221 bits (244), Expect = 2e-55 Identities = 160/185 (86%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 ||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||||||| Sbjct 726487 GTAGGGTAAAACTAACCTGCTTCACGACGGTTCAAACCCAGCTCGCATTCCCTATTAGTG 726546 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||||||||| ||| | || || ||| ||||||||||||||||||||||| Sbjct 726547 GGTGAACAATCCAACACTTGGCAAAATCAACTTTACAATGATAGGAAGAGCCGACATCGA 726606 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||||| Sbjct 726607 AGGATCAAAAAGCGGCGTCGCTATAAACGCTTGGCCACCACAAGCCAGTTATCTTTGTGG 726666 Query 217 TAACT 221 ||||| Sbjct 726667 TAACT 726671 >seq7 Length=2190396 Score = 208 bits (230), Expect = 1e-51 Identities = 150/173 (87%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct 177166 CATCAGTCGGGTAAAACTAACCTGTCTCACTACGGTCTAAACTCGGCTCACGTTCCCTAT 177107 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||||||||||||||||||| | || ||||||||||| ||| ||||||||||||| Sbjct 177106 TAGTGGGTGAACAATCCAAAGGTTGGTGAATTCTGCTTTACAGTGAAAGGAAGAGCCGAC 177047 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||||||||| || ||||||||||||||||| |||||||| |||||| | ||| Sbjct 177046 ATCGAAGGACCATAAAGCAACGTCGCTATGCACGCTTGGTCGCCACAGGACAG 176994 >seq5 Length=2503511 Score = 113 bits (124), Expect = 8e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146 |||||||||||||||| | ||||| |||| ||||||||||| | ||||| ||||||| Sbjct 2495411 CCTATTAGTGGGTGAAAATTCCAAAGCTTGGTGAATTCTGCTTTGCAATGATGGGAAGAG 2495352 Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 ||||||| |||||||||||| || || ||||| || ||||||| | ||||||| Sbjct 2495351 CCGACATTGAAGGATCAAAAGGCGACATCGCTTAAAAAGCTTGGCCGATGCAAGCCA 2495295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854369019456