Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20saginata_20[genbank_20GCA_5F001693075.2_202016-10-23] 3,626 sequences; 169,104,283 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq148 271 2e-70 >seq148 Length=170690 Score = 271 bits (300), Expect = 2e-70 Identities = 232/282 (82%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACA-AGACCCAAAAG--AGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||| ||||| || ||| || || || | | | |||||| | ||||| ||| Sbjct 140331 ACTCATTCCGATTACGGAGCCCCTCGAGGGAGTCCCGCACCGGTATTTCTCGTCACCACC 140390 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| |||| ||| |||||||||||||||| ||||||| ||||||||||| Sbjct 140391 TCCCCGTGCCGGGAATGGGCAATCTGCGCGCCTGCTGCCTCCCTTGGAAGTGGTAGCCGT 140450 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 140451 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATCACCATGGT 140510 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| ||||||||||||||| ||||||| || || |||||| | Sbjct 140511 AGGCAGGTCACCTACCATCGACAGTTGATAGGGCAGACATTTGAAGGACCCGTCGCCGAC 140570 Query 240 TCAAGGCC--ATGCGATTCGTTA-AGTTATTATGAATCACCA 278 |||||||| |||||| || | | |||| || |||||| Sbjct 140571 TCAAGGCCGACTGCGATCTGTAACAATTATCCAGAGTCACCA 140612 Score = 174 bits (192), Expect = 5e-41 Identities = 138/162 (85%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 |||||||||||||||||| ||| || ||||||||| || ||||| ||| ||||||| Sbjct 140783 GCATGTATTAGCTCTAGAGTTATTACAGTTATCCATTTAACG-GGTACGATCCAATAAAC 140841 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACA 462 ||| ||||||||||||||||||||| ||||||| ||| ||| || | ||| ||||| Sbjct 140842 CATAGCTGATTTAATGAGCCATTCGCGGTTTCACCGTACTAGG--GCCTGAACTGAGACA 140899 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||| |||||||||||||||||||||||||| Sbjct 140900 TGCATGGCTTAATCTCTGAGACAAGCATATGACTACTGGCAG 140941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510345232896