Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq12831 120 4e-25 >seq12831 Length=405 Score = 120 bits (132), Expect = 4e-25 Identities = 138/184 (75%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 223 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 281 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA----C 122 ||||||||| ||||||||||| | || | ||| ||||| || |||| | | Sbjct 282 GTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGC 341 Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 | ||| |||||| || ||| | ||||||||||||||||||| ||||||||||| | || Sbjct 342 AAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTT 401 Query 183 CCTT 186 |||| Sbjct 402 CCTT 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694311667763