Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq12831 244 2e-62 >seq12831 Length=405 Score = 244 bits (270), Expect = 2e-62 Identities = 280/377 (74%), Gaps = 36/377 (10%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| ||| Sbjct 39 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 98 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 99 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 158 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | ||| | |||| | | Sbjct 159 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT-CGATCA----AGAGCTTGC---ACC 210 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 || | |||| ||||| ||||||||||||||||| ||||||| || ||| || | Sbjct 211 CCAT-CATTTAATCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 269 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | ||||| |||||||||| ||||||||||| ||||| | ||| || || | ||| Sbjct 270 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC-GGCAT 328 Query 301 -AG-------------------------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTC 334 || || ||| | ||||||||| ||||||||| | | Sbjct 329 GAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCC 388 Query 335 ATTTTGCCGAGTTCCTT 351 |||||||| |||||||| Sbjct 389 ATTTTGCCTAGTTCCTT 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062260496256