Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq10236 183 1e-43 >seq10236 Length=237 Score = 183 bits (202), Expect = 1e-43 Identities = 187/242 (77%), Gaps = 14/242 (6%) Strand=Plus/Plus Query 323 ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACA 382 ||||||||||||||||||||||||||||| || ||| | || |||||| || || || | Sbjct 8 ACGCCCTATTCGGACTCGCTTTCGCTACGCCTGCCCTATAC-GGTTAAGCTTGCTACTGA 66 Query 383 ACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCAC 442 ||| || |||| | | |||| | ||||||| ||||||||||| | || || Sbjct 67 ACG-TAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACC----CCTTACGAG---- 117 Query 443 TTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGG 502 |||||||| | ||||| ||| ||||||||| |||||||||||||| || |||| Sbjct 118 ----GCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGG 173 Query 503 TACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGC 562 | |||||| |||||||||||||||||| || | |||||||||| || ||||||||| | Sbjct 174 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 233 Query 563 TT 564 || Sbjct 234 TT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817361330944