Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq10236 307 3e-81 >seq10236 Length=237 Score = 307 bits (340), Expect = 3e-81 Identities = 212/235 (90%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 135 ACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTG 194 |||||||| | |||||||||| |||||||||| |||||| ||||||||||| || |||| Sbjct 8 ACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAGCTT-GCTACTG 65 Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCC 254 || |||||||||||||||||||||||||||||||| ||||||| | | |||||| Sbjct 66 AACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTTACGAGGCTCCG 123 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 |||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 124 ACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGGGGTTCTTTTCG 182 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241436965504