Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq10967 93.3 4e-17 >seq10967 Length=1132 Score = 93.3 bits (102), Expect = 4e-17 Identities = 130/179 (73%), Gaps = 5/179 (3%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTAC 66 || ||||||||||| ||||| ||| | ||||| |||||| |||| ||| | || Sbjct 736 ACGTTTACTTTGAACAAATTTGAGTGCTCAAATCAGGCCGATGTTGCCTGAAAAGTTTTG 677 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||| ||||||||| | ||||||||||| || ||||| | ||| | |||| Sbjct 676 CATGGAATAATGGAATAGGAC-TTCGGTTCTATTTCGTTGGTTT-TCGGATCCGAAGTAA 619 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | || || ||||| || |||| | | ||||||||||| |||| Sbjct 618 TGATCAAAAGAGACAGGCGGGGACGTTTGTATGGCTGCGCTAGAGGTGAAATTCATGGA 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511934870240