Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq10847 230 8e-58 >seq10847 Length=419 Score = 230 bits (254), Expect = 8e-58 Identities = 276/367 (75%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 164 GGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGG 223 ||| ||||||||||||| ||||| |||||||||||| |||||| ||||||| | |||| Sbjct 2 GGAGATAGCTGGTTCTCCTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACTGTAGGGG 61 Query 224 GTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAA 283 ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct 62 GTAGAGCACTGTTTCGGCTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAA 121 Query 284 TGCGCATCAGT-TTTACCGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGA 340 | | | ||| | | ||||| | ||| ||||||||| |||||| | | Sbjct 122 TACCTACAAGTGCCGAGCATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAA 179 Query 341 GGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAA 400 || || || || ||| |||||||||| ||| || | | | ||||| | ||||| Sbjct 180 GGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTTATGGTTAAGTGGGA--AACGAT 237 Query 401 GTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGC 460 || || ||| |||||||||||| |||||||| |||||||||| | |||||||| || Sbjct 238 GTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGC 296 Query 461 GTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTA 519 |||| ||||||||||||||| | | ||| ||| || | |||| |||| | | || Sbjct 297 GTAATAGCTCACTAGTCGAGTCGGCCTGCGCGGAAGATGTAACGGG-GCTAAGCTATATA 355 Query 520 CCGAAGC 526 ||||||| Sbjct 356 CCGAAGC 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689378138624