Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq12831 188 2e-45 >seq12831 Length=405 Score = 188 bits (208), Expect = 2e-45 Identities = 210/278 (76%), Gaps = 22/278 (8%) Strand=Plus/Plus Query 288 TAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGA-GCATCTTTACTCGTA 345 |||| ||||| | |||||||||| |||| ||||||| || || ||||||| || | Sbjct 1 TAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCG-GATACACTGCATCTTCACAGCGA 59 Query 346 CTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAG 405 | ||||||||| | | || ||| |||||||| | |||||||||||||||||||| Sbjct 60 TTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAG 119 Query 406 GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCG 465 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 120 GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCG 179 Query 466 TTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTA 525 ||||| |||||||| || | | || ||| ||| ||| ||| Sbjct 180 TTTACCGGGGCTTCGATCAAGAG-CTTGCACCCCA----------TCA--------TTTA 220 Query 526 ACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | ||||| ||||||||||||||||| || ||||| || Sbjct 221 ATCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702176457856