Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq124733 196 7e-48
seq39205 145 1e-32
seq13233 138 2e-30
seq1804 132 7e-29
seq12997 129 9e-28
seq62404 120 5e-25
seq11368 96.9 5e-18
seq87402 78.8 1e-12
seq1757 78.8 1e-12
seq12202 75.2 2e-11
>seq124733
Length=1102
Score = 196 bits (216), Expect = 7e-48
Identities = 205/259 (79%), Gaps = 9/259 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 1082 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 1025
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | ||||||| ||| | ||||| | ||||| | | ||||| | ||
Sbjct 1024 CTCGTTCATGGGGAACAATTACAAGCCCCAATCCCTAGCACGAAGGAGATTCAACGGGTT 965
Query 120 ACCCGGACCTGTCGG-CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| | ||| |||| ||| || | | | || ||| | | ||||||||||||||||||
Sbjct 964 TCCCAGCCCTTTCGGGCCAGGGAGGCATCCACGCTGATTCCTTCAGTGTAGCGCGCGTGC 905
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAA 237
||||| | |||||||||||||||||||||||||||||| ||||| || |||| | ||||
Sbjct 904 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA--TTTCGTGTGGCTAA 848
Query 238 AAGGCCATC-TCCCTCGAA 255
| | | || |||||| ||
Sbjct 847 ACGCCACTCGTCCCTCTAA 829
>seq39205
Length=5034
Score = 145 bits (160), Expect = 1e-32
Identities = 166/218 (76%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||| |||||||||| ||| ||||| |||||| || |||| |||||||| |
Sbjct 1591 GTACAAAGGGCAGAGACGTAGTCAGCGCAAGCTT-ATGACTTGCACTTAGTAGGAATT-C 1648
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT-GAAATTTCAAAGATT 119
|||||| | | || |||||||| | |||||| |||||| | || | || ||
Sbjct 1649 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCCGTCACGACAGTGATGAAACAGTTT 1708
Query 120 ACCCGGACCTGTCGGCCAAGGTGA-TAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|| ||| |||| | |||| |||||||| ||| | ||| |||||||| |||
Sbjct 1709 GCCTAACCCTTTCGGGCCAGGTTCCTAGACTCGCTGACACCGTCATTGTAGCGCATGTGT 1768
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216
||||| | | ||||||||||||||||||||||||||||
Sbjct 1769 GGCCCCGGATATCTAAGGGCATCACAGACCTGTTATTG 1806
>seq13233
Length=11326
Score = 138 bits (152), Expect = 2e-30
Identities = 169/224 (75%), Gaps = 5/224 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| || ||||| ||||||| |
Sbjct 97 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTGCACTTACCAGGAATT-C 154
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | || |||||||| | ||||| |||||| | | || || ||
Sbjct 155 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCAGTCACGACGGTGATGAAACAGTTT 214
Query 120 ACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| | |||| | ||||| || | ||| |||||||| ||||
Sbjct 215 GCCCAACCCTTTCGGGCCAGGTTCCCAAACTCGCTGGCACCGTCATTGTAGCGCACGTGT 274
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222
||||| | ||||||||||| |||||||||||||||||| |||||
Sbjct 275 GGCCCCGGACATCTAAGGGTATCACAGACCTGTTATTG-CTCAA 317
>seq1804
Length=26765
Score = 132 bits (146), Expect = 7e-29
Identities = 170/225 (76%), Gaps = 7/225 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||| ||||||| ||| ||| ||||| |||||| || ||||| ||||||| |
Sbjct 14724 GTACAAAGGGCATGGACGTAATCAGCGCAAGCTT-ATGACTTGCACTTACCAGGAATT-C 14667
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | || |||||||| | ||||| |||||| | | || || ||
Sbjct 14666 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCAGTCACGACGGTGATGAAACAGTTT 14607
Query 120 ACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| | |||| ||||||| || | ||| |||||||| ||||
Sbjct 14606 GCCCAACCCTTTCGGGCCAGGTTCCCAGACTCGCTGGCACCGTCATTGTAGCGCACGTGT 14547
Query 179 GGCC-CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222
||| |||| ||||||||||||||||||||||||||||| |||||
Sbjct 14546 GGCTTCAGA-CATCTAAGGGCATCACAGACCTGTTATTG-CTCAA 14504
>seq12997
Length=11466
Score = 129 bits (142), Expect = 9e-28
Identities = 164/220 (75%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| | ||||| ||||||| |
Sbjct 2933 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTTCACTTACCAGGAATT-C 2876
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCC---CATCACGATGAAATTTCAAAGA 117
||| || | | || ||||| || || ||||| ||| ||| ||| | | ||
Sbjct 2875 CTCTTTCACGCGGAATAATTGTAAGCCTCGATCCCAGTCATGACGGTGA--TGAAACAGT 2818
Query 118 TTACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
|| || ||| |||| | ||| | |||||||| || | ||| |||||||| |||
Sbjct 2817 TTGCCTAACCCTTTCGGGCCAGGATCCTAGACTCGCTGGCACCGTCATTGTAGCGCACGT 2758
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216
| ||| | | ||||||||||||||||||||||||||||||
Sbjct 2757 GTGGCTCCGGACATCTAAGGGCATCACAGACCTGTTATTG 2718
>seq62404
Length=3035
Score = 120 bits (132), Expect = 5e-25
Identities = 160/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| || | |||||| || ||||| ||||||| |
Sbjct 524 GTACAAAGGGCAGGGACGTAATCAGCGCAGGCCT-ATGACTTGCACTTACCAGGAATT-C 467
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | || |||||||| | ||||| |||||| | | || || ||
Sbjct 466 CTCGTTCACGGGGAATAATTGCAAGCCCCGATCCCAGTCACGACGGTGATGAAACAGTTT 407
Query 120 ACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| | |||| ||||||| || | || || ||||| ||||
Sbjct 406 GCCCAACCCTTTCGGGCCAGGTTCCCAGACTCGCTGGCACCGACATTGAAGCGCACGTGT 347
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 215
||||| | ||||||||||||| |||||||||||||||
Sbjct 346 GGCCCCGGACATCTAAGGGCACCACAGACCTGTTATT 310
>seq11368
Length=12381
Score = 96.9 bits (106), Expect = 5e-18
Identities = 160/223 (72%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61
|||||||||||| ||||| ||| ||| ||||| |||||| || ||||| ||||| ||||
Sbjct 4815 TACAAAGGGCAGAAACGTAATCAGCGCAAGCTT-ATGACTTGCACTTACCAGGAA-TTCC 4758
Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATTA 120
| ||| | | || | | |||| | ||||| |||||| | || | || |
Sbjct 4757 TGGTTCACGGGGAATAGTCGCAAGCCCCGATCCCAGTCACGACGGTGATGAAACAGTTGG 4698
Query 121 CCCGGACCTGTCG-GCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|| ||| ||| |||| | | ||||| | || | | ||| |||||||| |||| |
Sbjct 4697 GCCAACCCTTTCGAGCCAGGTTCCCAGACTAGCTGGAACCGTCATTGTAGCGCACGTGTG 4638
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222
|||| | |||||||||| ||||| ||||||||| ||| |||||
Sbjct 4637 GCCC-GGACATCTAAGGACATCAAAGACCTGTTGTTG-CTCAA 4597
>seq87402
Length=1933
Score = 78.8 bits (86), Expect = 1e-12
Identities = 82/105 (78%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| || ||| | ||||| |||
Sbjct 561 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTGCACTTTCCAGGAA-TTC 618
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG 105
|||||| | | || |||||||| | |||| | ||| ||||
Sbjct 619 CTCGTTCACGGGAAATAATTGCAAACCCCGATCCTCGTCATGATG 663
>seq1757
Length=27001
Score = 78.8 bits (86), Expect = 1e-12
Identities = 61/73 (84%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 145 AGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 204
||||||| || | ||| |||||||| | || ||||| | ||||||||||||||||||
Sbjct 23176 AGACTCGCTGGCACCGTCATTGTAGCGCACATGTGGCCCCGGACATCTAAGGGCATCACA 23235
Query 205 GACCTGTTATTGC 217
|||||||||||||
Sbjct 23236 GACCTGTTATTGC 23248
>seq12202
Length=11907
Score = 75.2 bits (82), Expect = 2e-11
Identities = 145/208 (70%), Gaps = 12/208 (6%)
Strand=Plus/Plus
Query 15 GACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCA 74
|| ||| ||| ||| ||||| || ||| || || || || |||| ||||||| | || |
Sbjct 2565 GATGTAATCAGCGCAAGCTT-ATCACTTGCACTGACCAGAAATT-CCTCGTTCACGAGAA 2622
Query 75 ACAATTGCAATGATCTATCCCCATCACGA---TGAAATTTCAAAGATTA--CCCGGACCT 129
| || | | | ||||| ||||||| ||| | ||| ||| ||| | |||
Sbjct 2623 ATAAATTGAGGCCCCGATCCCAATCACGACGGTGATA----AAATATTTTGCCCAGCCCT 2678
Query 130 GTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAAC 188
|||| | |||| | ||||||| || | || ||||| || | || ||||| | ||
Sbjct 2679 TTCGGGCCAGGTTCTTAGACTCGCTGGCACCGTCTTTGTAGTGCACATGTGGCCCCGGAC 2738
Query 189 ATCTAAGGGCATCACAGACCTGTTATTG 216
||| ||||||||||||||| ||||||||
Sbjct 2739 ATCCAAGGGCATCACAGACTTGTTATTG 2766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750627731835
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |