Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq66030 145 3e-32
seq4505 127 8e-27
seq51625 122 4e-25
seq16225 122 4e-25
seq6993 122 4e-25
seq4264 118 4e-24
seq66079 109 2e-21
seq20624 109 2e-21
seq7226 96.9 1e-17
seq12347 95.1 5e-17
seq111402 86.0 3e-14
seq27940 86.0 3e-14
seq21600 86.0 3e-14
seq72613 84.2 9e-14
seq67784 84.2 9e-14
seq155164 80.6 1e-12
seq9187 78.8 4e-12
seq4200 78.8 4e-12
seq14941 77.0 1e-11
>seq66030
Length=2825
Score = 145 bits (160), Expect = 3e-32
Identities = 113/135 (84%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || | |||||||||||||||||||||||||| | || ||| |||||
Sbjct 183 GAGCAAGAGCGTACATCTTGGGACCCGAAAGATGGTGAACTATACTTGCGAAGGTTGAAG 124
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||||||||||||||||||| || |||| ||||| ||| |||||||||||| |||
Sbjct 123 TCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTACAAATCGATCGTATAATG 64
Query 669 TGGGTATAGGGGCGA 683
|| ||||||||||||
Sbjct 63 TGAGTATAGGGGCGA 49
>seq4505
Length=19242
Score = 127 bits (140), Expect = 8e-27
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || ||||| ||||| |||||||||| | ||||| || ||| |||||
Sbjct 9533 GAGCAAGAGCTTACATGTTGAGACCCAAAAGATGGTGGAATATGCTTGCGAAGGTTGAAG 9592
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| | |||| ||||| ||| |||||||||||| ||
Sbjct 9593 CCAGAGGAAACTCTGGTGGAGGAAGGTAGCGATTCTGACGTACAAATCGATCGTATAACG 9652
Query 669 TGGGTATAGGGGCGA 683
|| ||||||| ||||
Sbjct 9653 TGAGTATAGGAGCGA 9667
>seq51625
Length=3795
Score = 122 bits (134), Expect = 4e-25
Identities = 105/130 (81%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||||| ||||| || | ||||||||||||||||||| || || |||||
Sbjct 3666 GAGGAAGAGCATGCATGTTGAGAACAGAAAGATGGTGAACTATGCTTGCGAAGATTGAAG 3725
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || ||| ||||| ||| |||||||||||| ||
Sbjct 3726 CCAGAGGAAACTCTGGTGGAGGACCGTTGCGATTCTGACGTACAAATCGATCGTACAACG 3785
Query 669 TGGGTATAGG 678
|| |||||||
Sbjct 3786 TGCGTATAGG 3795
>seq16225
Length=10034
Score = 122 bits (134), Expect = 4e-25
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||| | || || || ||||||||||||||||||||||| || ||| |||||
Sbjct 6509 GAGCAAGAACGTACATGATGAGACCCGAAAGATGGTGAACTATGTTTGCGAAGGTTGAAG 6450
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || ||| ||||| |||||||||||||| | ||
Sbjct 6449 CCAGAGGAAACTCTGGTGGAGGACCGTGGCGATTCTGACGTGCAAATCGATCATATAACG 6390
Query 669 TGGGTATAGGGGCGA 683
|| || ||| |||||
Sbjct 6389 TGAGTGTAGCGGCGA 6375
>seq6993
Length=15917
Score = 122 bits (134), Expect = 4e-25
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || | ||| ||||||||||||||||||||||| || ||| |||||
Sbjct 6458 GAGCAAGAGCGTACATATTGACACCCGAAAGATGGTGAACTATGCTTGCGAAGGTTGAAG 6399
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||| |||||||||||||||| || |||| ||||| |||||||||| ||||| ||
Sbjct 6398 CCAAAGGAAACTCTGGTGGAAAATCTTAGCGATTCTGACGTGCAAATCAATCGTATAAGG 6339
Query 669 TGGGTATAGGGGCGA 683
|| |||| |||||||
Sbjct 6338 TGAGTATTGGGGCGA 6324
>seq4264
Length=19651
Score = 118 bits (130), Expect = 4e-24
Identities = 107/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || | ||| |||||||||| | ||||||||||| || ||| |||||
Sbjct 2768 GAGCAAGAGCGTACATTTTGAGACCCGAAAGCTAGTGAACTATGCTTGCGAAGGTTGAAG 2709
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||| |||||||||||||||| | |||| ||||| ||||| |||||||||| ||
Sbjct 2708 TCAGAAGAAACTCTGGTGGAGGACCATAGCGATTCTGACGTGCGAATCGATCGTATAACG 2649
Query 669 TGGGTATAGGGGCGA 683
|| ||||||||| ||
Sbjct 2648 TGAGTATAGGGGTGA 2634
>seq66079
Length=2823
Score = 109 bits (120), Expect = 2e-21
Identities = 80/93 (86%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
|||||||| |||||| |||||||| || | ||| ||||||||||||||||||||||||||
Sbjct 460 GACCCGAAGGATGGTAAACTATGCTTGTAAAGGATGAAGCCAGAGGAAACTCTGGTGGAG 519
Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662
| | |||| | ||| ||||||||||||||||
Sbjct 520 GACCATAGCGATCCTGACGTGCAAATCGATCGT 552
>seq20624
Length=8556
Score = 109 bits (120), Expect = 2e-21
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || ||||| |||| |||||||||||||||||| || || |||||
Sbjct 8316 GAGCAAGAGCGTACATGTTGAGACCAAAAAGATGGTGAACTATGCTTGCGAAGCTTGAAG 8375
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||| |||||||||||||||| | |||| | || || |||||||| |||| ||
Sbjct 8376 CCAGAAGAAACTCTGGTGGAGGACTGTAGCGAT--TGACGCGCAAATCGGTCGTATAACG 8433
Query 669 TGGGTATAGGGG 680
||||||||||||
Sbjct 8434 TGGGTATAGGGG 8445
>seq7226
Length=15674
Score = 96.9 bits (106), Expect = 1e-17
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609
|| |||||| || ||||| ||||||||||| | |||||||||| || | ||| ||||||
Sbjct 10485 AGGAAGAGCGTACATGTTGAGACCCGAAAGAGGATGAACTATGCTTGCAAAGGTTGAAGC 10426
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
|||||||||||||||||||| || |||| ||
Sbjct 10425 CAGAGGAAACTCTGGTGGAGAACCGTAGCGATT 10393
>seq12347
Length=11826
Score = 95.1 bits (104), Expect = 5e-17
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || ||||| ||||||||||| |||| ||||| || ||| |||||
Sbjct 5404 GAGAAAGAGCGTACATGTTGAAACCCGAAAGATAATGAAATATGCTTGTTAAGGTTGAAG 5345
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
| |||| ||||||||||||||| || |||| |||| |||| ||| ||||| ||
Sbjct 5344 CTAGAGAAAACTCTGGTGGAGGACCGTAGCGACTCTGAGGTGCGGATCCATCGTATAACG 5285
Query 669 TGGGTATAGGGG 680
|| ||||||||
Sbjct 5284 TGAATATAGGGG 5273
>seq111402
Length=1327
Score = 86.0 bits (94), Expect = 3e-14
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || | ||| |||||||||||| |||||||||| || ||| |||||
Sbjct 1207 GAGCAAGAGCTTACATTTTGAAACCCGAAAGATGATGAACTATGCTTGCGAAGGTTGAAG 1148
Query 609 CCAGAGGAAACTCTGGTGGA 628
||||||||||||||||||||
Sbjct 1147 CCAGAGGAAACTCTGGTGGA 1128
>seq27940
Length=6784
Score = 86.0 bits (94), Expect = 3e-14
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
||||| ||| || ||||||||||||||| | || ||| |||||||| ||||||||||
Sbjct 3590 TGTTGAGACTCGGAAGATGGTGAACTATACTTGCGAAGGTTGAAGCCACAGGAAACTCTA 3649
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| | || |||| || || | || |||| ||||| || || ||||| | ||||
Sbjct 3650 GTGGATGACCGTAGCGATTATGACATGTGAATCTATCGTATAACTTTAGTATATGAGCGA 3709
>seq21600
Length=8268
Score = 86.0 bits (94), Expect = 3e-14
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634
||||||||||||||||| | || ||| |||||||||||||||| |||||||||| ||
Sbjct 7253 GAAAGATGGTGAACTATACTTGCGAAGGTTGAAGCCAGAGGAAACGCTGGTGGAGGACCG 7312
Query 635 CAGCGGTTCTGGCGTGCAAATC 656
|||| ||||| |||| ||||
Sbjct 7313 TAGCGATTCTGACGTGAGAATC 7334
>seq72613
Length=2499
Score = 84.2 bits (92), Expect = 9e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662
||||||||||||||||||||||||||| || |||| ||||| ||||||||||||||||
Sbjct 2051 TGAAGCCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGT 2109
>seq67784
Length=2733
Score = 84.2 bits (92), Expect = 9e-14
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609
|| |||||| | ||||| || || || ||| |||||||||| | ||| ||||||
Sbjct 1332 AGCAAGAGCTTCCATGTTGAAACGCGGAAAATGTTGAACTATGCTTACTAAGGTTGAAGC 1273
Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669
||||||||| ||| ||||||| || |||| | ||| |||| ||||| ||| | || |
Sbjct 1272 CAGAGGAAATTCTAGTGGAGGACCGTAGCGATCCTGACGTGAAAATCAATCTTATAACGT 1213
Query 670 GGGTATAGG 678
| |||||||
Sbjct 1212 GAGTATAGG 1204
>seq155164
Length=748
Score = 80.6 bits (88), Expect = 1e-12
Identities = 67/82 (82%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || ||| || |||| |||| ||||| |||||| | || ||| |||||
Sbjct 661 GAGCAAGAGCGTACCTGCTGAGACCTGAAATATGGTAAACTATCCTTGCGAAGGTTGAAG 602
Query 609 CCAGAGGAAACTCTGGTGGAGG 630
|||||||| |||||||||||||
Sbjct 601 CCAGAGGAGACTCTGGTGGAGG 580
>seq9187
Length=13895
Score = 78.8 bits (86), Expect = 4e-12
Identities = 85/113 (75%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
||||| || ||||||||||||||||| ||| || ||| ||| ||||||| | | ||
Sbjct 8511 TGTTGAGATCCGAAAGATGGTGAACTGTGCTTGCGAAGGTAGAAAACAGAGGACAGTTTG 8452
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
|||| || || ||| | ||| ||||||||||||| || || || |||||
Sbjct 8451 GTGGGGGACCGTAGCAATCCTGACGTGCAAATCGATTGTGTAACGTGAGTATA 8399
>seq4200
Length=19763
Score = 78.8 bits (86), Expect = 4e-12
Identities = 66/81 (81%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
||| |||||||||| |||||||||||||| | | |||| ||||| |||||||||| ||
Sbjct 9888 AGGTTGAAGCCAGAAGAAACTCTGGTGGATGACTGTAGCGATTCTGACGTGCAAATCTAT 9829
Query 660 CGTCAAATTTGGGTATAGGGG 680
||| || || |||||||||
Sbjct 9828 CGTGTAACGTGAGTATAGGGG 9808
>seq14941
Length=10535
Score = 77.0 bits (84), Expect = 1e-11
Identities = 94/127 (74%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|||| ||||| ||| | |||| |||| |||| ||| || ||| |||||||||| |||
Sbjct 1031 CATACATGTTGAGACTCAAAAGTTGGTTAACTGTGCTTGCGAAGGTTGAAGCCAGACGAA 1090
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT-CAAATTTGGGTATA 676
||||||||||||| | || | ||||| ||| |||| || || ||| | ||||
Sbjct 1091 ACTCTGGTGGAGGACCATAGTGATTCTGAGATGCGAATCCATAGTATAAACATCATTATA 1150
Query 677 GGGGCGA 683
|||||||
Sbjct 1151 GGGGCGA 1157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2075959484950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |