Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq66030 145 3e-32 seq4505 127 8e-27 seq51625 122 4e-25 seq16225 122 4e-25 seq6993 122 4e-25 seq4264 118 4e-24 seq66079 109 2e-21 seq20624 109 2e-21 seq7226 96.9 1e-17 seq12347 95.1 5e-17 seq111402 86.0 3e-14 seq27940 86.0 3e-14 seq21600 86.0 3e-14 seq72613 84.2 9e-14 seq67784 84.2 9e-14 seq155164 80.6 1e-12 seq9187 78.8 4e-12 seq4200 78.8 4e-12 seq14941 77.0 1e-11 >seq66030 Length=2825 Score = 145 bits (160), Expect = 3e-32 Identities = 113/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || | |||||||||||||||||||||||||| | || ||| ||||| Sbjct 183 GAGCAAGAGCGTACATCTTGGGACCCGAAAGATGGTGAACTATACTTGCGAAGGTTGAAG 124 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||||||||||||||||||| || |||| ||||| ||| |||||||||||| ||| Sbjct 123 TCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTACAAATCGATCGTATAATG 64 Query 669 TGGGTATAGGGGCGA 683 || |||||||||||| Sbjct 63 TGAGTATAGGGGCGA 49 >seq4505 Length=19242 Score = 127 bits (140), Expect = 8e-27 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || ||||| ||||| |||||||||| | ||||| || ||| ||||| Sbjct 9533 GAGCAAGAGCTTACATGTTGAGACCCAAAAGATGGTGGAATATGCTTGCGAAGGTTGAAG 9592 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| | |||| ||||| ||| |||||||||||| || Sbjct 9593 CCAGAGGAAACTCTGGTGGAGGAAGGTAGCGATTCTGACGTACAAATCGATCGTATAACG 9652 Query 669 TGGGTATAGGGGCGA 683 || ||||||| |||| Sbjct 9653 TGAGTATAGGAGCGA 9667 >seq51625 Length=3795 Score = 122 bits (134), Expect = 4e-25 Identities = 105/130 (81%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||||| ||||| || | ||||||||||||||||||| || || ||||| Sbjct 3666 GAGGAAGAGCATGCATGTTGAGAACAGAAAGATGGTGAACTATGCTTGCGAAGATTGAAG 3725 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| || ||| ||||| ||| |||||||||||| || Sbjct 3726 CCAGAGGAAACTCTGGTGGAGGACCGTTGCGATTCTGACGTACAAATCGATCGTACAACG 3785 Query 669 TGGGTATAGG 678 || ||||||| Sbjct 3786 TGCGTATAGG 3795 >seq16225 Length=10034 Score = 122 bits (134), Expect = 4e-25 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||| | || || || ||||||||||||||||||||||| || ||| ||||| Sbjct 6509 GAGCAAGAACGTACATGATGAGACCCGAAAGATGGTGAACTATGTTTGCGAAGGTTGAAG 6450 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| || ||| ||||| |||||||||||||| | || Sbjct 6449 CCAGAGGAAACTCTGGTGGAGGACCGTGGCGATTCTGACGTGCAAATCGATCATATAACG 6390 Query 669 TGGGTATAGGGGCGA 683 || || ||| ||||| Sbjct 6389 TGAGTGTAGCGGCGA 6375 >seq6993 Length=15917 Score = 122 bits (134), Expect = 4e-25 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || | ||| ||||||||||||||||||||||| || ||| ||||| Sbjct 6458 GAGCAAGAGCGTACATATTGACACCCGAAAGATGGTGAACTATGCTTGCGAAGGTTGAAG 6399 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||| |||||||||||||||| || |||| ||||| |||||||||| ||||| || Sbjct 6398 CCAAAGGAAACTCTGGTGGAAAATCTTAGCGATTCTGACGTGCAAATCAATCGTATAAGG 6339 Query 669 TGGGTATAGGGGCGA 683 || |||| ||||||| Sbjct 6338 TGAGTATTGGGGCGA 6324 >seq4264 Length=19651 Score = 118 bits (130), Expect = 4e-24 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || | ||| |||||||||| | ||||||||||| || ||| ||||| Sbjct 2768 GAGCAAGAGCGTACATTTTGAGACCCGAAAGCTAGTGAACTATGCTTGCGAAGGTTGAAG 2709 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||| |||||||||||||||| | |||| ||||| ||||| |||||||||| || Sbjct 2708 TCAGAAGAAACTCTGGTGGAGGACCATAGCGATTCTGACGTGCGAATCGATCGTATAACG 2649 Query 669 TGGGTATAGGGGCGA 683 || ||||||||| || Sbjct 2648 TGAGTATAGGGGTGA 2634 >seq66079 Length=2823 Score = 109 bits (120), Expect = 2e-21 Identities = 80/93 (86%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||| |||||| |||||||| || | ||| |||||||||||||||||||||||||| Sbjct 460 GACCCGAAGGATGGTAAACTATGCTTGTAAAGGATGAAGCCAGAGGAAACTCTGGTGGAG 519 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 | | |||| | ||| |||||||||||||||| Sbjct 520 GACCATAGCGATCCTGACGTGCAAATCGATCGT 552 >seq20624 Length=8556 Score = 109 bits (120), Expect = 2e-21 Identities = 104/132 (79%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || ||||| |||| |||||||||||||||||| || || ||||| Sbjct 8316 GAGCAAGAGCGTACATGTTGAGACCAAAAAGATGGTGAACTATGCTTGCGAAGCTTGAAG 8375 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||| |||||||||||||||| | |||| | || || |||||||| |||| || Sbjct 8376 CCAGAAGAAACTCTGGTGGAGGACTGTAGCGAT--TGACGCGCAAATCGGTCGTATAACG 8433 Query 669 TGGGTATAGGGG 680 |||||||||||| Sbjct 8434 TGGGTATAGGGG 8445 >seq7226 Length=15674 Score = 96.9 bits (106), Expect = 1e-17 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 || |||||| || ||||| ||||||||||| | |||||||||| || | ||| |||||| Sbjct 10485 AGGAAGAGCGTACATGTTGAGACCCGAAAGAGGATGAACTATGCTTGCAAAGGTTGAAGC 10426 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 |||||||||||||||||||| || |||| || Sbjct 10425 CAGAGGAAACTCTGGTGGAGAACCGTAGCGATT 10393 >seq12347 Length=11826 Score = 95.1 bits (104), Expect = 5e-17 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || ||||| ||||||||||| |||| ||||| || ||| ||||| Sbjct 5404 GAGAAAGAGCGTACATGTTGAAACCCGAAAGATAATGAAATATGCTTGTTAAGGTTGAAG 5345 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 | |||| ||||||||||||||| || |||| |||| |||| ||| ||||| || Sbjct 5344 CTAGAGAAAACTCTGGTGGAGGACCGTAGCGACTCTGAGGTGCGGATCCATCGTATAACG 5285 Query 669 TGGGTATAGGGG 680 || |||||||| Sbjct 5284 TGAATATAGGGG 5273 >seq111402 Length=1327 Score = 86.0 bits (94), Expect = 3e-14 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || | ||| |||||||||||| |||||||||| || ||| ||||| Sbjct 1207 GAGCAAGAGCTTACATTTTGAAACCCGAAAGATGATGAACTATGCTTGCGAAGGTTGAAG 1148 Query 609 CCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||| Sbjct 1147 CCAGAGGAAACTCTGGTGGA 1128 >seq27940 Length=6784 Score = 86.0 bits (94), Expect = 3e-14 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||| ||| || ||||||||||||||| | || ||| |||||||| |||||||||| Sbjct 3590 TGTTGAGACTCGGAAGATGGTGAACTATACTTGCGAAGGTTGAAGCCACAGGAAACTCTA 3649 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| | || |||| || || | || |||| ||||| || || ||||| | |||| Sbjct 3650 GTGGATGACCGTAGCGATTATGACATGTGAATCTATCGTATAACTTTAGTATATGAGCGA 3709 >seq21600 Length=8268 Score = 86.0 bits (94), Expect = 3e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634 ||||||||||||||||| | || ||| |||||||||||||||| |||||||||| || Sbjct 7253 GAAAGATGGTGAACTATACTTGCGAAGGTTGAAGCCAGAGGAAACGCTGGTGGAGGACCG 7312 Query 635 CAGCGGTTCTGGCGTGCAAATC 656 |||| ||||| |||| |||| Sbjct 7313 TAGCGATTCTGACGTGAGAATC 7334 >seq72613 Length=2499 Score = 84.2 bits (92), Expect = 9e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 ||||||||||||||||||||||||||| || |||| ||||| |||||||||||||||| Sbjct 2051 TGAAGCCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGT 2109 >seq67784 Length=2733 Score = 84.2 bits (92), Expect = 9e-14 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 || |||||| | ||||| || || || ||| |||||||||| | ||| |||||| Sbjct 1332 AGCAAGAGCTTCCATGTTGAAACGCGGAAAATGTTGAACTATGCTTACTAAGGTTGAAGC 1273 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 ||||||||| ||| ||||||| || |||| | ||| |||| ||||| ||| | || | Sbjct 1272 CAGAGGAAATTCTAGTGGAGGACCGTAGCGATCCTGACGTGAAAATCAATCTTATAACGT 1213 Query 670 GGGTATAGG 678 | ||||||| Sbjct 1212 GAGTATAGG 1204 >seq155164 Length=748 Score = 80.6 bits (88), Expect = 1e-12 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || ||| || |||| |||| ||||| |||||| | || ||| ||||| Sbjct 661 GAGCAAGAGCGTACCTGCTGAGACCTGAAATATGGTAAACTATCCTTGCGAAGGTTGAAG 602 Query 609 CCAGAGGAAACTCTGGTGGAGG 630 |||||||| ||||||||||||| Sbjct 601 CCAGAGGAGACTCTGGTGGAGG 580 >seq9187 Length=13895 Score = 78.8 bits (86), Expect = 4e-12 Identities = 85/113 (75%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||| || ||||||||||||||||| ||| || ||| ||| ||||||| | | || Sbjct 8511 TGTTGAGATCCGAAAGATGGTGAACTGTGCTTGCGAAGGTAGAAAACAGAGGACAGTTTG 8452 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 |||| || || ||| | ||| ||||||||||||| || || || ||||| Sbjct 8451 GTGGGGGACCGTAGCAATCCTGACGTGCAAATCGATTGTGTAACGTGAGTATA 8399 >seq4200 Length=19763 Score = 78.8 bits (86), Expect = 4e-12 Identities = 66/81 (81%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||| |||||||||| |||||||||||||| | | |||| ||||| |||||||||| || Sbjct 9888 AGGTTGAAGCCAGAAGAAACTCTGGTGGATGACTGTAGCGATTCTGACGTGCAAATCTAT 9829 Query 660 CGTCAAATTTGGGTATAGGGG 680 ||| || || ||||||||| Sbjct 9828 CGTGTAACGTGAGTATAGGGG 9808 >seq14941 Length=10535 Score = 77.0 bits (84), Expect = 1e-11 Identities = 94/127 (74%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||| ||||| ||| | |||| |||| |||| ||| || ||| |||||||||| ||| Sbjct 1031 CATACATGTTGAGACTCAAAAGTTGGTTAACTGTGCTTGCGAAGGTTGAAGCCAGACGAA 1090 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT-CAAATTTGGGTATA 676 ||||||||||||| | || | ||||| ||| |||| || || ||| | |||| Sbjct 1091 ACTCTGGTGGAGGACCATAGTGATTCTGAGATGCGAATCCATAGTATAAACATCATTATA 1150 Query 677 GGGGCGA 683 ||||||| Sbjct 1151 GGGGCGA 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075959484950