Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq136838 273 5e-71 >seq136838 Length=926 Score = 273 bits (302), Expect = 5e-71 Identities = 183/204 (90%), Gaps = 9/204 (4%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 693 CGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 634 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 CTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 574 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| || Sbjct 573 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-GC---- 519 Query 181 GCTAACCCCATCAATTAACCTTCC 204 ||||||||| |||| ||||| Sbjct 518 ----ACCCCATCATTTAATCTTCC 499 Score = 87.8 bits (96), Expect = 5e-15 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 |||||| |||||||||||||| | |||||| ||||||||| || ||||||||||||||| Sbjct 195 CCTTCTTCCGAAGTTACGGTGTCAATTTGCCGAGTTCCTTCTCCAGAGTTCTCTCAAGCG 136 Query 403 CCTTGGTATTCTC 415 |||| | || ||| Sbjct 135 CCTTAGAATACTC 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258425043648