Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq26361 167 4e-39
seq12202 167 4e-39
seq1757 159 6e-37
seq87402 158 2e-36
seq39205 152 8e-35
seq55439 147 3e-33
seq1804 147 3e-33
seq129929 138 2e-30
seq13233 136 6e-30
seq138191 127 3e-27
seq124733 118 2e-24
seq72530 116 6e-24
seq34032 113 7e-23
seq964 107 3e-21
seq94476 102 1e-19
seq182852 95.1 2e-17
seq8561 95.1 2e-17
seq12997 91.5 2e-16
seq6379 86.0 1e-14
seq62404 80.6 4e-13
seq19122 80.6 4e-13
seq9275 78.8 1e-12
>seq26361
Length=7112
Score = 167 bits (184), Expect = 4e-39
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct 6721 CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGGAATTAACAAGATAAATCGCTCCACCA 6662
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||| ||||||||||||| ||| |||||||||||||| | ||||||||||
Sbjct 6661 ACTAAGAACGACCATGCACCACCATCCACCGAATCAAGAAAGAGTTTTCAATCTGTC 6605
>seq12202
Length=11907
Score = 167 bits (184), Expect = 4e-39
Identities = 112/125 (90%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 2902 CTATTTAGTAGGTTAAAGTCTCGTTCGTTAGAGGAATTAACCAGACAAATCGCTCCACCA 2961
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261
|||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||
Sbjct 2962 ACTAAGAACGGCCATGCAACACCATCCACCGAATCAAGAAAGAGCTTTCAATCTGTCAAT 3021
Query 262 CCTCG 266
|||||
Sbjct 3022 CCTCG 3026
Score = 73.4 bits (80), Expect = 6e-11
Identities = 58/70 (83%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| ||||| ||||| || | || ||||| | ||||| ||||||||||||||
Sbjct 2697 ACTCGCTGGCACCGTCTTTGTAGTGCACATGTGGCCCCGGACATCCAAGGGCATCACAGA 2756
Query 62 CCTGTTATTG 71
| ||||||||
Sbjct 2757 CTTGTTATTG 2766
>seq1757
Length=27001
Score = 159 bits (176), Expect = 6e-37
Identities = 100/108 (93%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210
|||| || ||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 23372 AGGTCAAAGTCGCGTTCGTTATCGGAATTAACCAGATAAATCACTCCACCAACTAAGAAC 23431
Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct 23432 GGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTTTCAATCTGTC 23479
Score = 93.3 bits (102), Expect = 7e-17
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| |||||| |||||||| | || ||||| | ||||||||||||||||||||
Sbjct 23178 ACTCGCTGGCACCGTCATTGTAGCGCACATGTGGCCCCGGACATCTAAGGGCATCACAGA 23237
Query 62 CCTGTTATTGC 72
|||||||||||
Sbjct 23238 CCTGTTATTGC 23248
>seq87402
Length=1933
Score = 158 bits (174), Expect = 2e-36
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| |||||| ||||||||||||| |||||||||||||||||||| ||| |||
Sbjct 877 CTATTTAGTGGGTTAAAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGATCCGCCA 936
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||
Sbjct 937 ACTAAGAACGGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTTTCAATCTTTC 993
>seq39205
Length=5034
Score = 152 bits (168), Expect = 8e-35
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||
Sbjct 1926 CTATTTAGTAGGTTAAAGTCTCATTCGTTACAGGAATTAACCAGACAAATCGCTCCACCA 1985
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||
Sbjct 1986 ACTAAGAACGGCCATGCACCATCATCCACCGAATCAAGAAAGAGCTTCCAATTTGTC 2042
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | |||||| |||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 1737 ACTCGCTGACACCGTCATTGTAGCGCATGTGTGGCCCCGGATATCTAAGGGCATCACAGA 1796
Query 62 CCTGTTATTG 71
||||||||||
Sbjct 1797 CCTGTTATTG 1806
>seq55439
Length=3497
Score = 147 bits (162), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 3/120 (3%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||||||| | |||||||||||||||| ||||||||| |||| ||||||||
Sbjct 2401 CTATTTAGTAGGTTAACGCCTCGTTCGTTATCGGAGTTAACCAGAAAAATTCCTCCACCA 2342
Query 202 ACTAAGAACGGCCATGCACCACCACC---CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| ||||||||||| || ||||||||||| |||| ||||||||||
Sbjct 2341 ACTAAGAACGGCCAAGCACCACCACCATACACTGAATCAAGAAAAAGCTTTCAATCTGTC 2282
>seq1804
Length=26765
Score = 147 bits (162), Expect = 3e-33
Identities = 102/116 (88%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
||||||| ||||||| || |||||||||| |||||| ||||||| ||||| |||||| ||
Sbjct 14363 TATTTAGTAGGTTAAAGTTTCGTTCGTTACCGGAATCAACCAGAAAAATCGCTCCACAAA 14304
Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||| ||| |||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct 14303 CTAACAACTGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTTTCAATCTGTC 14248
Score = 87.8 bits (96), Expect = 3e-15
Identities = 68/77 (88%), Gaps = 3/77 (4%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCC-CAGAACATCTAAGGGCATCACAG 60
||||| |||| |||||| |||||||| |||| ||| |||| ||||||||||||||||||
Sbjct 14578 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCTTCAGA-CATCTAAGGGCATCACAG 14520
Query 61 ACCTGTTATTGCCTCAA 77
||||||||||| |||||
Sbjct 14519 ACCTGTTATTG-CTCAA 14504
>seq129929
Length=1021
Score = 138 bits (152), Expect = 2e-30
Identities = 100/116 (86%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||||| || |||||| ||| ||||||||||||||||| |||| || ||| ||||||||
Sbjct 452 CTATTCAGTGGGTTAAAGTCGCGTTCGTTATCGGAATTGACCATACTAATTGCTCCACCA 511
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
|||||||| ||| ||||||||||| ||| |||||||||||||||| |||||||||
Sbjct 512 ACTAAGAATGGCAATGCACCACCAGCCACCGAATCAAGAAAGAGCTTTCAATCTGT 567
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| |||||| |||||||| |||| || || | |||||||||||||||||| |
Sbjct 276 ACTCGCTGGCACCGTCACTGTAGCGCACGTGTGGTCCCGGACATCTAAGGGCATCACATA 335
Query 62 CCTGTTATTG 71
| ||||||||
Sbjct 336 CATGTTATTG 345
>seq13233
Length=11326
Score = 136 bits (150), Expect = 6e-30
Identities = 83/88 (94%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 453 CTATTTAGTAGGTTAAAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGATCCACCA 512
Query 202 ACTAAGAACGGCCATGCACCACCACCCA 229
|||||||||||||||||||||||| |||
Sbjct 513 ACTAAGAACGGCCATGCACCACCATCCA 540
Score = 93.3 bits (102), Expect = 7e-17
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| |||||| |||||||| |||| ||||| | ||||||||||| ||||||||
Sbjct 243 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCCCCGGACATCTAAGGGTATCACAGA 302
Query 62 CCTGTTATTGCCTCAA 77
|||||||||| |||||
Sbjct 303 CCTGTTATTG-CTCAA 317
>seq138191
Length=909
Score = 127 bits (140), Expect = 3e-27
Identities = 79/85 (93%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233
||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||
Sbjct 909 GGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCATCCACCGA 850
Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258
|||| ||||||||| ||||||||||
Sbjct 849 ATCATGAAAGAGCTTTCAATCTGTC 825
>seq124733
Length=1102
Score = 118 bits (130), Expect = 2e-24
Identities = 90/104 (87%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 926 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 867
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| || ||| ||||| | |||| | ||||||||||||||
Sbjct 866 -CTC-AATTTCGTGTGGCTAAACGCCACTCGTCCCTCTAAGAAG 825
>seq72530
Length=2503
Score = 116 bits (128), Expect = 6e-24
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216
||||||||||||||||| |||| |||| || |||| | ||||||||||| || ||||||
Sbjct 1459 AGGTCTCGTTCGTTATCAGAATCTACCATACGAATCGCCCCACCAACTAAAAATGGCCAT 1400
Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTC 265
|||||||| | | ||||||||||||||||| ||| ||| || |||||
Sbjct 1399 ACACCACCATCTACAGAATCAAGAAAGAGCTTTCAGTCTATCAGCCCTC 1351
>seq34032
Length=5754
Score = 113 bits (124), Expect = 7e-23
Identities = 99/122 (81%), Gaps = 6/122 (5%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA--CAAATCACTCCAC 199
|||||||| ||||||| |||| ||||||| || || ||||||| | |||||||||||||
Sbjct 4935 CTATTTAGTAGGTTAAAGTCTTGTTCGTTGTCAGATTTAACCAAAAACAAATCACTCCAC 4994
Query 200 CAACTAAGAACG----GCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
||||||| ||| |||||||| |||| | | ||||||||||||| || |||||||
Sbjct 4995 CAACTAATAACAAACAGCCATGCATTACCATCAACCGAATCAAGAAAGATCTCTCAATCT 5054
Query 256 GT 257
||
Sbjct 5055 GT 5056
>seq964
Length=32428
Score = 107 bits (118), Expect = 3e-21
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216
|||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||| ||||
Sbjct 29109 AGGTCTCGTTCGTTATCGAAATTAACCATACAAATCACTCCCCCAACTAGGAACGTCCAT 29168
Query 217 GCACCACCACCCAT 230
||||||||| ||||
Sbjct 29169 GCACCACCATCCAT 29182
>seq94476
Length=1725
Score = 102 bits (112), Expect = 1e-19
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||||||| | | | |||||||||||||||| || |||||||| || ||| |
Sbjct 613 CTATTTAGTAGGTTAAAGGCGCATTCGTTATCGGAATTAGCCTGACAAATCGCTTCACTA 554
Query 202 ACTAAGAACGGCCATGCACCA 222
|||||||||||||||||||||
Sbjct 553 ACTAAGAACGGCCATGCACCA 533
>seq182852
Length=547
Score = 95.1 bits (104), Expect = 2e-17
Identities = 54/55 (98%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 547 TCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 493
>seq8561
Length=14414
Score = 95.1 bits (104), Expect = 2e-17
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||||||| || |||| |||||||||||||| |||| |||||||||||||| ||||||||
Sbjct 9194 CTATTTAATAGTTTAAAGTCTCGTTCGTTATGGGAAGTAACCAGACAAATCGCTCCACCA 9253
Query 202 ACTAAGAACGGCCAT 216
||||||||| || ||
Sbjct 9254 ACTAAGAACAGCTAT 9268
Score = 80.6 bits (88), Expect = 4e-13
Identities = 61/71 (86%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 8 TGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 67
|||| |||||| |||||||| |||| ||||| | |||| ||||| |||||||| ||||||
Sbjct 8999 TGGCACCGTCATTGTAGCGCACGTGTGGCCCCGGACATTTAAGGACATCACAGTCCTGTT 9058
Query 68 ATTGCCTCAAA 78
|||| ||||||
Sbjct 9059 ATTG-CTCAAA 9068
>seq12997
Length=11466
Score = 91.5 bits (100), Expect = 2e-16
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| |||||| |||||||| |||| ||| | | ||||||||||||||||||||
Sbjct 2787 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCTCCGGACATCTAAGGGCATCACAGA 2728
Query 62 CCTGTTATTG 71
||||||||||
Sbjct 2727 CCTGTTATTG 2718
>seq6379
Length=16602
Score = 86.0 bits (94), Expect = 1e-14
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217
||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 15956 GTTATCGGAATTAACCAGACAAATCACTCCACCAATTAAGAACGGCCATG 15907
>seq62404
Length=3035
Score = 80.6 bits (88), Expect = 4e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| ||| || || ||||| |||| ||||| | ||||||||||||| ||||||
Sbjct 378 ACTCGCTGGCACCGACATTGAAGCGCACGTGTGGCCCCGGACATCTAAGGGCACCACAGA 319
Query 62 CCTGTTATT 70
|||||||||
Sbjct 318 CCTGTTATT 310
>seq19122
Length=9006
Score = 80.6 bits (88), Expect = 4e-13
Identities = 61/72 (85%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246
||| || ||| |||||||||||||||||||||||||||| ||| || ||||||| |||
Sbjct 3104 CAATTCGCTCAACCAACTAAGAACGGCCATGCACCACCATCCACCAAAACAAGAAAAAGC 3163
Query 247 TATCAATCTGTC 258
| ||||| ||||
Sbjct 3164 TTTCAATTTGTC 3175
>seq9275
Length=13824
Score = 78.8 bits (86), Expect = 1e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235
||||||||||||||| | || || || ||||| |||| | |||||| |||||| ||||
Sbjct 12962 AATTAACCAGACAAAGCGCTGCATCAGCTAAGTACGGTCGTGCACCGCCACCCGCAGAAC 12903
Query 236 CAAGAAAGAGCTATCAATCTGTC 258
||| || |||||||| ||||||
Sbjct 12902 TAAGGAAAAGCTATCATTCTGTC 12880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795345979689
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |