Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq26361 167 4e-39 seq12202 167 4e-39 seq1757 159 6e-37 seq87402 158 2e-36 seq39205 152 8e-35 seq55439 147 3e-33 seq1804 147 3e-33 seq129929 138 2e-30 seq13233 136 6e-30 seq138191 127 3e-27 seq124733 118 2e-24 seq72530 116 6e-24 seq34032 113 7e-23 seq964 107 3e-21 seq94476 102 1e-19 seq182852 95.1 2e-17 seq8561 95.1 2e-17 seq12997 91.5 2e-16 seq6379 86.0 1e-14 seq62404 80.6 4e-13 seq19122 80.6 4e-13 seq9275 78.8 1e-12 >seq26361 Length=7112 Score = 167 bits (184), Expect = 4e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct 6721 CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGGAATTAACAAGATAAATCGCTCCACCA 6662 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| ||||||||||||| ||| |||||||||||||| | |||||||||| Sbjct 6661 ACTAAGAACGACCATGCACCACCATCCACCGAATCAAGAAAGAGTTTTCAATCTGTC 6605 >seq12202 Length=11907 Score = 167 bits (184), Expect = 4e-39 Identities = 112/125 (90%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||| Sbjct 2902 CTATTTAGTAGGTTAAAGTCTCGTTCGTTAGAGGAATTAACCAGACAAATCGCTCCACCA 2961 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261 |||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||| Sbjct 2962 ACTAAGAACGGCCATGCAACACCATCCACCGAATCAAGAAAGAGCTTTCAATCTGTCAAT 3021 Query 262 CCTCG 266 ||||| Sbjct 3022 CCTCG 3026 Score = 73.4 bits (80), Expect = 6e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| ||||| ||||| || | || ||||| | ||||| |||||||||||||| Sbjct 2697 ACTCGCTGGCACCGTCTTTGTAGTGCACATGTGGCCCCGGACATCCAAGGGCATCACAGA 2756 Query 62 CCTGTTATTG 71 | |||||||| Sbjct 2757 CTTGTTATTG 2766 >seq1757 Length=27001 Score = 159 bits (176), Expect = 6e-37 Identities = 100/108 (93%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 |||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 23372 AGGTCAAAGTCGCGTTCGTTATCGGAATTAACCAGATAAATCACTCCACCAACTAAGAAC 23431 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| ||| |||||||||||||||| |||||||||| Sbjct 23432 GGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTTTCAATCTGTC 23479 Score = 93.3 bits (102), Expect = 7e-17 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| |||||| |||||||| | || ||||| | |||||||||||||||||||| Sbjct 23178 ACTCGCTGGCACCGTCATTGTAGCGCACATGTGGCCCCGGACATCTAAGGGCATCACAGA 23237 Query 62 CCTGTTATTGC 72 ||||||||||| Sbjct 23238 CCTGTTATTGC 23248 >seq87402 Length=1933 Score = 158 bits (174), Expect = 2e-36 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||| ||||||||||||| |||||||||||||||||||| ||| ||| Sbjct 877 CTATTTAGTGGGTTAAAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGATCCGCCA 936 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| |||||||||||||||| ||||||| || Sbjct 937 ACTAAGAACGGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTTTCAATCTTTC 993 >seq39205 Length=5034 Score = 152 bits (168), Expect = 8e-35 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||||||| ||||| ||||||| ||||||||||||||||||| |||||||| Sbjct 1926 CTATTTAGTAGGTTAAAGTCTCATTCGTTACAGGAATTAACCAGACAAATCGCTCCACCA 1985 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| || ||| |||||||||||||||| |||| |||| Sbjct 1986 ACTAAGAACGGCCATGCACCATCATCCACCGAATCAAGAAAGAGCTTCCAATTTGTC 2042 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | |||||| |||||||| ||| ||||| | | |||||||||||||||||| Sbjct 1737 ACTCGCTGACACCGTCATTGTAGCGCATGTGTGGCCCCGGATATCTAAGGGCATCACAGA 1796 Query 62 CCTGTTATTG 71 |||||||||| Sbjct 1797 CCTGTTATTG 1806 >seq55439 Length=3497 Score = 147 bits (162), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||||||| | |||||||||||||||| ||||||||| |||| |||||||| Sbjct 2401 CTATTTAGTAGGTTAACGCCTCGTTCGTTATCGGAGTTAACCAGAAAAATTCCTCCACCA 2342 Query 202 ACTAAGAACGGCCATGCACCACCACC---CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| ||||||||||| || ||||||||||| |||| |||||||||| Sbjct 2341 ACTAAGAACGGCCAAGCACCACCACCATACACTGAATCAAGAAAAAGCTTTCAATCTGTC 2282 >seq1804 Length=26765 Score = 147 bits (162), Expect = 3e-33 Identities = 102/116 (88%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 ||||||| ||||||| || |||||||||| |||||| ||||||| ||||| |||||| || Sbjct 14363 TATTTAGTAGGTTAAAGTTTCGTTCGTTACCGGAATCAACCAGAAAAATCGCTCCACAAA 14304 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| ||| |||||||||||||| ||| |||||||||||||||| |||||||||| Sbjct 14303 CTAACAACTGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTTTCAATCTGTC 14248 Score = 87.8 bits (96), Expect = 3e-15 Identities = 68/77 (88%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCC-CAGAACATCTAAGGGCATCACAG 60 ||||| |||| |||||| |||||||| |||| ||| |||| |||||||||||||||||| Sbjct 14578 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCTTCAGA-CATCTAAGGGCATCACAG 14520 Query 61 ACCTGTTATTGCCTCAA 77 ||||||||||| ||||| Sbjct 14519 ACCTGTTATTG-CTCAA 14504 >seq129929 Length=1021 Score = 138 bits (152), Expect = 2e-30 Identities = 100/116 (86%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||| || |||||| ||| ||||||||||||||||| |||| || ||| |||||||| Sbjct 452 CTATTCAGTGGGTTAAAGTCGCGTTCGTTATCGGAATTGACCATACTAATTGCTCCACCA 511 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||| ||| ||||||||||| ||| |||||||||||||||| ||||||||| Sbjct 512 ACTAAGAATGGCAATGCACCACCAGCCACCGAATCAAGAAAGAGCTTTCAATCTGT 567 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| |||||| |||||||| |||| || || | |||||||||||||||||| | Sbjct 276 ACTCGCTGGCACCGTCACTGTAGCGCACGTGTGGTCCCGGACATCTAAGGGCATCACATA 335 Query 62 CCTGTTATTG 71 | |||||||| Sbjct 336 CATGTTATTG 345 >seq13233 Length=11326 Score = 136 bits (150), Expect = 6e-30 Identities = 83/88 (94%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 453 CTATTTAGTAGGTTAAAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGATCCACCA 512 Query 202 ACTAAGAACGGCCATGCACCACCACCCA 229 |||||||||||||||||||||||| ||| Sbjct 513 ACTAAGAACGGCCATGCACCACCATCCA 540 Score = 93.3 bits (102), Expect = 7e-17 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| |||||| |||||||| |||| ||||| | ||||||||||| |||||||| Sbjct 243 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCCCCGGACATCTAAGGGTATCACAGA 302 Query 62 CCTGTTATTGCCTCAA 77 |||||||||| ||||| Sbjct 303 CCTGTTATTG-CTCAA 317 >seq138191 Length=909 Score = 127 bits (140), Expect = 3e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || Sbjct 909 GGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCATCCACCGA 850 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 |||| ||||||||| |||||||||| Sbjct 849 ATCATGAAAGAGCTTTCAATCTGTC 825 >seq124733 Length=1102 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 926 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 867 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| || ||| ||||| | |||| | |||||||||||||| Sbjct 866 -CTC-AATTTCGTGTGGCTAAACGCCACTCGTCCCTCTAAGAAG 825 >seq72530 Length=2503 Score = 116 bits (128), Expect = 6e-24 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||||||| |||| |||| || |||| | ||||||||||| || |||||| Sbjct 1459 AGGTCTCGTTCGTTATCAGAATCTACCATACGAATCGCCCCACCAACTAAAAATGGCCAT 1400 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTC 265 |||||||| | | ||||||||||||||||| ||| ||| || ||||| Sbjct 1399 ACACCACCATCTACAGAATCAAGAAAGAGCTTTCAGTCTATCAGCCCTC 1351 >seq34032 Length=5754 Score = 113 bits (124), Expect = 7e-23 Identities = 99/122 (81%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA--CAAATCACTCCAC 199 |||||||| ||||||| |||| ||||||| || || ||||||| | ||||||||||||| Sbjct 4935 CTATTTAGTAGGTTAAAGTCTTGTTCGTTGTCAGATTTAACCAAAAACAAATCACTCCAC 4994 Query 200 CAACTAAGAACG----GCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 ||||||| ||| |||||||| |||| | | ||||||||||||| || ||||||| Sbjct 4995 CAACTAATAACAAACAGCCATGCATTACCATCAACCGAATCAAGAAAGATCTCTCAATCT 5054 Query 256 GT 257 || Sbjct 5055 GT 5056 >seq964 Length=32428 Score = 107 bits (118), Expect = 3e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 |||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||| |||| Sbjct 29109 AGGTCTCGTTCGTTATCGAAATTAACCATACAAATCACTCCCCCAACTAGGAACGTCCAT 29168 Query 217 GCACCACCACCCAT 230 ||||||||| |||| Sbjct 29169 GCACCACCATCCAT 29182 >seq94476 Length=1725 Score = 102 bits (112), Expect = 1e-19 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||||||| | | | |||||||||||||||| || |||||||| || ||| | Sbjct 613 CTATTTAGTAGGTTAAAGGCGCATTCGTTATCGGAATTAGCCTGACAAATCGCTTCACTA 554 Query 202 ACTAAGAACGGCCATGCACCA 222 ||||||||||||||||||||| Sbjct 553 ACTAAGAACGGCCATGCACCA 533 >seq182852 Length=547 Score = 95.1 bits (104), Expect = 2e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 547 TCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 493 >seq8561 Length=14414 Score = 95.1 bits (104), Expect = 2e-17 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| || |||| |||||||||||||| |||| |||||||||||||| |||||||| Sbjct 9194 CTATTTAATAGTTTAAAGTCTCGTTCGTTATGGGAAGTAACCAGACAAATCGCTCCACCA 9253 Query 202 ACTAAGAACGGCCAT 216 ||||||||| || || Sbjct 9254 ACTAAGAACAGCTAT 9268 Score = 80.6 bits (88), Expect = 4e-13 Identities = 61/71 (86%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 8 TGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 67 |||| |||||| |||||||| |||| ||||| | |||| ||||| |||||||| |||||| Sbjct 8999 TGGCACCGTCATTGTAGCGCACGTGTGGCCCCGGACATTTAAGGACATCACAGTCCTGTT 9058 Query 68 ATTGCCTCAAA 78 |||| |||||| Sbjct 9059 ATTG-CTCAAA 9068 >seq12997 Length=11466 Score = 91.5 bits (100), Expect = 2e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| |||||| |||||||| |||| ||| | | |||||||||||||||||||| Sbjct 2787 ACTCGCTGGCACCGTCATTGTAGCGCACGTGTGGCTCCGGACATCTAAGGGCATCACAGA 2728 Query 62 CCTGTTATTG 71 |||||||||| Sbjct 2727 CCTGTTATTG 2718 >seq6379 Length=16602 Score = 86.0 bits (94), Expect = 1e-14 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 15956 GTTATCGGAATTAACCAGACAAATCACTCCACCAATTAAGAACGGCCATG 15907 >seq62404 Length=3035 Score = 80.6 bits (88), Expect = 4e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| ||| || || ||||| |||| ||||| | ||||||||||||| |||||| Sbjct 378 ACTCGCTGGCACCGACATTGAAGCGCACGTGTGGCCCCGGACATCTAAGGGCACCACAGA 319 Query 62 CCTGTTATT 70 ||||||||| Sbjct 318 CCTGTTATT 310 >seq19122 Length=9006 Score = 80.6 bits (88), Expect = 4e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 ||| || ||| |||||||||||||||||||||||||||| ||| || ||||||| ||| Sbjct 3104 CAATTCGCTCAACCAACTAAGAACGGCCATGCACCACCATCCACCAAAACAAGAAAAAGC 3163 Query 247 TATCAATCTGTC 258 | ||||| |||| Sbjct 3164 TTTCAATTTGTC 3175 >seq9275 Length=13824 Score = 78.8 bits (86), Expect = 1e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 ||||||||||||||| | || || || ||||| |||| | |||||| |||||| |||| Sbjct 12962 AATTAACCAGACAAAGCGCTGCATCAGCTAAGTACGGTCGTGCACCGCCACCCGCAGAAC 12903 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 ||| || |||||||| |||||| Sbjct 12902 TAAGGAAAAGCTATCATTCTGTC 12880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795345979689