Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq94476 89.7 3e-16 seq62404 87.8 1e-15 seq87402 84.2 1e-14 seq1804 80.6 2e-13 seq149673 75.2 7e-12 seq11368 75.2 7e-12 seq8561 75.2 7e-12 seq964 75.2 7e-12 seq124733 73.4 2e-11 >seq94476 Length=1725 Score = 89.7 bits (98), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| ||||| || ||||||||| | ||||||||| ||||||||||||||||||||| Sbjct 1090 TCACTAAACCATT-CAGTCGGTAGTA-GAGACGGGCGGTGTGTACAAAGGGCAGGGACGT 1033 Query 110 AATACAACGCAAGCT 124 ||| || |||||||| Sbjct 1032 AAT-CAGCGCAAGCT 1019 >seq62404 Length=3035 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| ||||| || ||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 563 TCACTAAACCATT-CAGTCGGTAG-AAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGT 506 Query 110 AATACAACGCAAGC 123 ||| || |||| || Sbjct 505 AAT-CAGCGCAGGC 493 >seq87402 Length=1933 Score = 84.2 bits (92), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| ||||| || ||| || || ||||||||||| ||||||||||||||||||||| Sbjct 522 TCACTAAACCATT-CAATCGATATTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGT 579 Query 110 AATACAACGCAAGCT 124 ||| || |||||||| Sbjct 580 AAT-CAGCGCAAGCT 593 >seq1804 Length=26765 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| |||| || ||||||||| ||||||| ||| |||||||||||||| |||||| Sbjct 14763 TCACTAAATCATT-CAATCGGTAGTA-GCGACGGACGGTGTGTACAAAGGGCATGGACGT 14706 Query 110 AATACAACGCAAGCT 124 ||| || |||||||| Sbjct 14705 AAT-CAGCGCAAGCT 14692 >seq149673 Length=792 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 737 TCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 792 >seq11368 Length=12381 Score = 75.2 bits (82), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| |||||| | |||||||| ||||||||||| || |||||||||||| |||| Sbjct 4855 TCACTAAACCATTTAAC-CGGTAGTA-GCGACGGGCGGTGTTTACAAAGGGCAGAAACGT 4798 Query 110 AATACAACGCAAGCT 124 ||| || |||||||| Sbjct 4797 AAT-CAGCGCAAGCT 4784 >seq8561 Length=14414 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| ||||| || || |||||| ||||||||||| |||||||||||||||||| || Sbjct 8800 TCACTAAACCATT-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAGGT 8857 Query 110 AAT 112 ||| Sbjct 8858 AAT 8860 >seq964 Length=32428 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| ||||| || ||||||||| |||||||| || |||||||||||| |||||||| Sbjct 28729 TCACTAAACCATT-CAATCGGTAGTA-GCGACGGGTGGTGTGTACAAAGGGTAGGGACGT 28786 Query 110 AAT 112 ||| Sbjct 28787 AAT 28789 >seq124733 Length=1102 Score = 73.4 bits (80), Expect = 2e-11 Identities = 50/54 (93%), Gaps = 2/54 (4%) Strand=Plus/Minus Query 71 TAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 1101 TAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300268799420