Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq94476 89.7 3e-16
seq62404 87.8 1e-15
seq87402 84.2 1e-14
seq1804 80.6 2e-13
seq149673 75.2 7e-12
seq11368 75.2 7e-12
seq8561 75.2 7e-12
seq964 75.2 7e-12
seq124733 73.4 2e-11
>seq94476
Length=1725
Score = 89.7 bits (98), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| ||||| || ||||||||| | ||||||||| |||||||||||||||||||||
Sbjct 1090 TCACTAAACCATT-CAGTCGGTAGTA-GAGACGGGCGGTGTGTACAAAGGGCAGGGACGT 1033
Query 110 AATACAACGCAAGCT 124
||| || ||||||||
Sbjct 1032 AAT-CAGCGCAAGCT 1019
>seq62404
Length=3035
Score = 87.8 bits (96), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| ||||| || ||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 563 TCACTAAACCATT-CAGTCGGTAG-AAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGT 506
Query 110 AATACAACGCAAGC 123
||| || |||| ||
Sbjct 505 AAT-CAGCGCAGGC 493
>seq87402
Length=1933
Score = 84.2 bits (92), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| ||||| || ||| || || ||||||||||| |||||||||||||||||||||
Sbjct 522 TCACTAAACCATT-CAATCGATATTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGT 579
Query 110 AATACAACGCAAGCT 124
||| || ||||||||
Sbjct 580 AAT-CAGCGCAAGCT 593
>seq1804
Length=26765
Score = 80.6 bits (88), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| |||| || ||||||||| ||||||| ||| |||||||||||||| ||||||
Sbjct 14763 TCACTAAATCATT-CAATCGGTAGTA-GCGACGGACGGTGTGTACAAAGGGCATGGACGT 14706
Query 110 AATACAACGCAAGCT 124
||| || ||||||||
Sbjct 14705 AAT-CAGCGCAAGCT 14692
>seq149673
Length=792
Score = 75.2 bits (82), Expect = 7e-12
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand=Plus/Plus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107
||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 737 TCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 792
>seq11368
Length=12381
Score = 75.2 bits (82), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| |||||| | |||||||| ||||||||||| || |||||||||||| ||||
Sbjct 4855 TCACTAAACCATTTAAC-CGGTAGTA-GCGACGGGCGGTGTTTACAAAGGGCAGAAACGT 4798
Query 110 AATACAACGCAAGCT 124
||| || ||||||||
Sbjct 4797 AAT-CAGCGCAAGCT 4784
>seq8561
Length=14414
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| ||||| || || |||||| ||||||||||| |||||||||||||||||| ||
Sbjct 8800 TCACTAAACCATT-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAGGT 8857
Query 110 AAT 112
|||
Sbjct 8858 AAT 8860
>seq964
Length=32428
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
||||||| ||||| || ||||||||| |||||||| || |||||||||||| ||||||||
Sbjct 28729 TCACTAAACCATT-CAATCGGTAGTA-GCGACGGGTGGTGTGTACAAAGGGTAGGGACGT 28786
Query 110 AAT 112
|||
Sbjct 28787 AAT 28789
>seq124733
Length=1102
Score = 73.4 bits (80), Expect = 2e-11
Identities = 50/54 (93%), Gaps = 2/54 (4%)
Strand=Plus/Minus
Query 71 TAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 1101 TAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300268799420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |