Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq124733 118 1e-24
seq30154 98.7 1e-18
seq1031 89.7 5e-16
seq12997 78.8 1e-12
seq1601 77.0 3e-12
seq12985 73.4 4e-11
>seq124733
Length=1102
Score = 118 bits (130), Expect = 1e-24
Identities = 134/178 (75%), Gaps = 5/178 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT----TGCTCGAATACATTACCA 68
||||||||||||||||||||| ||||||||||||| || || ||||| ||
Sbjct 154 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATTCACAAGCCTGAATAATGGTGCA 213
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
||||||||| ||||||||| | |||||||||||||| ||||| | || | ||||||
Sbjct 214 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACTGGAGGTAATG 272
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
|| || | ||| | |||||| | ||||| || | |||||||||||||||||
Sbjct 273 ATTAACAGGGACAAACGGGGGCATTCGTATTGCGGCGTTAGAGGTGAAATTCTTGGAT 330
>seq30154
Length=6371
Score = 98.7 bits (108), Expect = 1e-18
Identities = 133/178 (75%), Gaps = 8/178 (4%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69
||||||||||| ||||| || | |||| |||||||||| || ||| ||| |||
Sbjct 336 TTTACTTTGAACAAATTTAAGTGCTCAAGACAGGCCTTTGTGCCTAGAAATTCTTA-CAT 278
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA-CCGCCCGTAATG 128
|||||||| |||||||| | |||||||||||||| ||||| | ||| ||| | |||||
Sbjct 277 GGAATAATGAAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAC-TAATG 221
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| || | ||| || |||||| | |||| ||| | |||||||||||| ||||
Sbjct 220 GTTAAGAGGGACAGACGGGGGCATTTGTATAGCGGTGTTAGAGGTGAAATTCTGGGAT 163
>seq1031
Length=31827
Score = 89.7 bits (98), Expect = 5e-16
Identities = 128/177 (72%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC--CATG 70
||||||||||| |||| | | | |||| | ||||||||| | | | ||| ||||
Sbjct 21584 TTTACTTTGAACAAATGTGGGTGCTCAAGGAAGGCCTTTGTGCCTAGAAATTCTTGCATG 21525
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| |||||||| | ||||||||||||| |||| | ||| | ||||||||
Sbjct 21524 GAATAATGAAATAGGACTTT-GGTTCTATTTTGTTTGTTT-TCGGATCCGAAGTAATGAT 21467
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187
|| | ||| || |||||| | |||| ||| | |||||||||||| |||||
Sbjct 21466 TAAGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTCGGATT 21410
>seq12997
Length=11466
Score = 78.8 bits (86), Expect = 1e-12
Identities = 80/101 (79%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTA-GAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC--CAT 69
||||||||||| ||||| ||| | |||| ||||||||||| | | | ||| |||
Sbjct 2558 TTTACTTTGAACAAATTTTGAGTGCTCAAGGCAGGCCTTTGTGCCTAGAAATTCTTGCAT 2617
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
|||||||| |||||||| | |||||||||||||| |||||
Sbjct 2618 GGAATAATGAAATAGGACTT-CGGTTCTATTTTGTTGGTTT 2657
>seq1601
Length=27832
Score = 77.0 bits (84), Expect = 3e-12
Identities = 126/177 (71%), Gaps = 6/177 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG---CTCGAATACATTACCAT 69
||||||||||| |||| || | | || |||||||||| || ||| | || |||
Sbjct 11007 TTTACTTTGAACCAATTTGAATGCTTAAGACAGGCCTTTGTGCCTAGAA-ATTTTTGCAT 11065
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
| |||||| |||||||| | |||||||||||||| |||||| ||| | || | |
Sbjct 11066 GAAATAATGAAATAGGACTT-CGGTTCTATTTTGTTGGTTTC-CGGATCCGAAGTTAAGG 11123
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| || | ||| || |||||| | |||| ||| | |||||||||||| ||||
Sbjct 11124 TTAAGAGGGAGAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTGGGAT 11180
>seq12985
Length=11470
Score = 73.4 bits (80), Expect = 4e-11
Identities = 124/176 (70%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACAT--TACCATG 70
||||||||| | ||||| ||| | |||| ||||||||||| | | | || | ||||
Sbjct 9285 TTTACTTTGCACAAATTTGAGTGCTCAAGGCAGGCCTTTGTGCCTAGAAATTCTTGCATG 9344
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| || | ||| | | ||||||| | || ||||| | ||| | |||||| |
Sbjct 9345 GAATAATGAAAGAAGAC-TTCAGTTCTATATGGTTGGTTT-TCGGATCCGAAGTAATGGT 9402
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| | ||| || |||||| | |||| |||| | ||||||||| || ||||
Sbjct 9403 TAGGAGGGACAGACGGGGGCATTTGTATGGCTTTGTTAGAGGTGAAATACTGGGAT 9458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511065689760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |