Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq124733 205 2e-50
seq13233 178 2e-42
seq1804 165 2e-38
seq62404 161 2e-37
seq39205 159 7e-37
seq12997 154 3e-35
seq11368 118 2e-24
seq129929 113 9e-23
seq12202 113 9e-23
seq8561 113 9e-23
seq94476 87.8 3e-15
seq1757 87.8 3e-15
seq87402 86.0 1e-14
>seq124733
Length=1102
Score = 205 bits (226), Expect = 2e-50
Identities = 205/260 (79%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| ||| || ||| ||||||||||||||||
Sbjct 825 CTTCTTAGAGGGACGAGTGGCGTTTAGCCACACGAAATT-GAG-CAATAACAGGTCTGTG 882
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TTCAT 188
|||||||||||||| | ||||||||||||||||||||||| || || || | | | |
Sbjct 883 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATGCCT 942
Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248
| ||| | ||| |||| ||||| || | | || ||| ||||||| ||||| | | |
Sbjct 943 C-CCTGGCCCGAAAGGGCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCT 1001
Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308
|| |||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||
Sbjct 1002 TGTAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGA 1061
Query 309 TTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||
Sbjct 1062 TTACGTCCCTGCCCTTTGTA 1081
>seq13233
Length=11326
Score = 178 bits (196), Expect = 2e-42
Identities = 199/262 (76%), Gaps = 7/262 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
|||||||||||||| || | || || || ||| || ||| |||||||||||||
Sbjct 357 CTTCTTAGAGGGACAGACGACACATCGAAGTCGTACGAAATT-GAG-CAATAACAGGTCT 300
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187
||||| ||||||||||| | ||||| |||| |||||||| |||| | |||| ||||||
Sbjct 299 GTGATACCCTTAGATGTCCGGGGCCACACGTGCGCTACAATGACGGTGCCAGCGAGTTTG 240
Query 188 TCACCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
| | ||||| ||| || |||| || || || | | | |||||| ||||| | |
Sbjct 239 GGAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGG 180
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
||||||||||| | | | |||||||||| ||| ||||| || ||||| ||| ||| |
Sbjct 179 CTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAAGCTTGCGCT 120
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||
Sbjct 119 GATTACGTCCCTGCCCTTTGTA 98
>seq1804
Length=26765
Score = 165 bits (182), Expect = 2e-38
Identities = 173/222 (78%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGG-GCCGCACGCGCGCTACAC 167
||||| |||||||||||||||||||||||||||||| ||| ||| |||| ||||||||
Sbjct 14504 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGT-CTGAAGCCACACGTGCGCTACAA 14561
Query 168 TGACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226
|||| | |||| ||||| | |||| | ||| |||| |||| || || || | | |
Sbjct 14562 TGACGGTGCCAGCGAGTCTGGGAACCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCAC 14621
Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286
|||||| ||||| | | ||||||||||| | | | |||||||||| ||| |||||
Sbjct 14622 CGTCGTGACTGGGATCGGGGCTTGCAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGT 14681
Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||||| ||| ||| ||||||||||| |||||||||||
Sbjct 14682 GCAAGTCATAAGCTTGCGCTGATTACGTCCATGCCCTTTGTA 14723
>seq62404
Length=3035
Score = 161 bits (178), Expect = 2e-37
Identities = 193/258 (75%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
|||||||||||||| ||| || || ||| || ||| |||||||||||||||
Sbjct 268 CTTCTTAGAGGGACAGACGGAGACAGACGTACGAAATT-GAGA-AATAACAGGTCTGTGG 325
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCA 190
||||||||||||| | ||||| |||| ||||| || || | | |||| ||||| | |
Sbjct 326 TGCCCTTAGATGTCCGGGGCCACACGTGCGCTTCAATGTCGGTGCCAGCGAGTCTGGGAA 385
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| | ||| |||| |||| || || || | | | |||||| ||||| | | |||
Sbjct 386 CCTGGCCCGAAAGGGTTGGGCAAACTGTTTCATCACCGTCGTGACTGGGATCGGGGCTTG 445
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| ||| ||||| || ||||| || ||| |||||
Sbjct 446 CAATTATTCCCCGTGAACGAGGAATTCCTGGTAAGTGCAAGTCATAGGCCTGCGCTGATT 505
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 506 ACGTCCCTGCCCTTTGTA 523
>seq39205
Length=5034
Score = 159 bits (176), Expect = 7e-37
Identities = 165/215 (77%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||||||||||||||||||||||||| | | ||||| ||| |||||||| |||| |
Sbjct 1806 CAATAACAGGTCTGTGATGCCCTTAGATATCCGGGGCCACACATGCGCTACAATGACGGT 1747
Query 175 GCCAACGAGTTCATCACCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
| || ||||| | | | ||||| ||| || | || || || || | | ||||||||
Sbjct 1746 GTCAGCGAGTCTAGGAACCTGGCCCGAAAGGGTTAGGCAAACTGTTTCATCACTGTCGTG 1687
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
|||||| | | ||||||||||| | | | |||||||||| |||| |||| || |||
Sbjct 1686 ACGGGGATCGGGGCTTGCAATTATTCCCCGTGAACGAGGAATTCCTACTAAGTGCAAGTC 1627
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||| ||| ||| |||||| ||||||||||||
Sbjct 1626 ATAAGCTTGCGCTGACTACGTCTCTGCCCTTTGTA 1592
>seq12997
Length=11466
Score = 154 bits (170), Expect = 3e-35
Identities = 164/215 (76%), Gaps = 1/215 (0%)
Strand=Plus/Plus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||||||||||||||||||||||||||| | | ||| |||| |||||||| |||| |
Sbjct 2718 CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGAGCCACACGTGCGCTACAATGACGGT 2777
Query 175 GCCAACGAGTTCATCA-CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||| ||||| | | ||| | ||| |||| | || || || || | | | ||| ||
Sbjct 2778 GCCAGCGAGTCTAGGATCCTGGCCCGAAAGGGTTAGGCAAACTGTTTCATCACCGTCATG 2837
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
||||| ||| || |||||||| | | | || ||||||| ||| ||||| | |||
Sbjct 2838 ACTGGGATCGAGGCTTACAATTATTCCGCGTGAAAGAGGAATTCCTGGTAAGTGAAAGTC 2897
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||| ||| |||||||||||||||||||||||
Sbjct 2898 ATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 2932
>seq11368
Length=12381
Score = 118 bits (130), Expect = 2e-24
Identities = 161/221 (73%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168
||||| ||| ||||||||| ||||| |||||||||| | ||||| |||| |||||||| |
Sbjct 4597 TTGAG-CAACAACAGGTCTTTGATGTCCTTAGATGTCC-GGGCCACACGTGCGCTACAAT 4654
Query 169 GACAGAGCCAACGAGTTCATCACCTTGGC-CGGAAGGTCTGGGTAATCTTGTTAAACTCT 227
||| | ||| | ||| | | |||| || |||| ||| | || || | | |
Sbjct 4655 GACGGTTCCAGCTAGTCTGGGAACCTGGCTCGAAAGGGTTGGCCCAACTGTTTCATCACC 4714
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
|||||| ||||| | | |||| | |||| | | | ||| |||||| ||| ||||| |
Sbjct 4715 GTCGTGACTGGGATCGGGGCTTGCGACTATTCCCCGTGAACCAGGAATTCCTGGTAAGTG 4774
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| ||||||||| ||||||||||||
Sbjct 4775 CAAGTCATAAGCTTGCGCTGATTACGTTTCTGCCCTTTGTA 4815
>seq129929
Length=1021
Score = 113 bits (124), Expect = 9e-23
Identities = 151/206 (73%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174
|||||||| || |||||||||||||||||| | || || |||| |||||||| |||| |
Sbjct 345 CAATAACATGTATGTGATGCCCTTAGATGTCCGGGACCACACGTGCGCTACAGTGACGGT 286
Query 175 GCCAACGAGTT-CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||| |||||| | || | | ||| ||| ||||| || | || | | |||||
Sbjct 285 GCCAGCGAGTTGGAGAACGTGGCCCGAAAGAGCTGGGCAAGCGGTTTCATCAGCATCGTG 226
Query 234 -CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
|||| | ||| | |||||||||| | | | ||||| |||| ||| ||||| || ||
Sbjct 225 ACTGGTATTGGAG-ACTGCAATTATTCCCCGTGAACGACGAATTCCTGGTAAGTGCAAGT 167
Query 293 CATCAGCACGCGTTGATTACGTCCCT 318
||| ||| ||| ||||| ||||||
Sbjct 166 CATAAGCTTGCGCTGATTGTGTCCCT 141
>seq12202
Length=11907
Score = 113 bits (124), Expect = 9e-23
Identities = 177/249 (71%), Gaps = 7/249 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA----AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127
||||||||||| ||| |||| || || || ||| || || |||||||| ||||
Sbjct 2811 CTTCTTAGAGGAACTGACGGCACATTGAAGTCGTACGAAATT-GAT-CAATAACAAGTCT 2754
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186
||||||||||| ||||| | ||||| || | || ||||| ||| | |||| ||||| |
Sbjct 2753 GTGATGCCCTTGGATGTCCGGGGCCACATGTGCACTACAAAGACGGTGCCAGCGAGTCTA 2694
Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246
| |||| | ||| |||| ||||| || | || | | | |||||| | ||||| | |
Sbjct 2693 AGAACCTGGCCCGAAAGGGCTGGGCAAAATATTTTATCACCGTCGTGATTGGGATCGGGG 2634
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
| | ||||| ||| | |||||||||| || || || || || || ||| ||| |
Sbjct 2633 CCTCAATTTATTTCTCGTGAACGAGGAATTTCTGGTCAGTGCAAGTGATAAGCTTGCGCT 2574
Query 307 GATTACGTC 315
|||||| ||
Sbjct 2573 GATTACATC 2565
>seq8561
Length=14414
Score = 113 bits (124), Expect = 9e-23
Identities = 165/231 (71%), Gaps = 12/231 (5%)
Strand=Plus/Minus
Query 108 TTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167
|||||| |||||||||| |||||||| ||||| |||| | ||||| |||| ||||||||
Sbjct 9068 TTTGAG-CAATAACAGGACTGTGATGTCCTTAAATGTCCGGGGCCACACGTGCGCTACAA 9010
Query 168 TGACAGAGCC--AACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||| | ||| |||| | | |||| | | | |||| ||||| | || | | |
Sbjct 9009 TGACGGTGCCAGAACGTCTGGA-AACCTGGCCTGAAAGGGTTGGGTGAACTGTCTCATCA 8951
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| |||||| ||||| | | ||||||||||| | | | |||||||||| || ||||
Sbjct 8950 CCGTCGTGACTGGGATCGGGGTTTGCAATTATTCCCCATGAACGAGGAATTTCTGGTAAT 8891
Query 286 CGCGTGTCATCAGCACGCG--------TTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||| ||||||| |||||||||||||||
Sbjct 8890 TGAAAGTCATAAGCTTGCGCTTCCGAAATGATTACCTCCCTGCCCTTTGTA 8840
>seq94476
Length=1725
Score = 87.8 bits (96), Expect = 3e-15
Identities = 123/171 (72%), Gaps = 5/171 (3%)
Strand=Plus/Plus
Query 159 GCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTT 217
|||||||| ||| |||||| ||||| | |||| | ||| |||| |||| || ||
Sbjct 884 GCGCTACAATGAGGGAGCCAGCGAGTCTGGGAACCTGGCCCGAAAGGGTTGGGCAAACTG 943
Query 218 GTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGC 277
|| | | | || ||| ||||| | | |||| ||||| | | | |||||||||| |
Sbjct 944 TTTCACCACCGTTGTGACTGGGATCGGGACATGCAGTTATTCCCCGTGAACGAGGAATTC 1003
Query 278 CTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || || ||||| ||| ||| |||||||||||||||||||||||
Sbjct 1004 CTGGT----GCAAGTCATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 1050
>seq1757
Length=27001
Score = 87.8 bits (96), Expect = 3e-15
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||||||||||||||||| | ||||| || | |||||||| |||| |
Sbjct 23248 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCCACATGTGCGCTACAATGACGG 23189
Query 174 AGCCAACGAGT 184
|||| |||||
Sbjct 23188 TGCCAGCGAGT 23178
>seq87402
Length=1933
Score = 86.0 bits (94), Expect = 1e-14
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| |||| |||| || || || | | | || || | |||| | | |||||||||
Sbjct 693 CCGAAAGGGTTGGGCAAACTGTTTCATCACCATCATGACGAGGATCGGGGTTTGCAATTA 634
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
|| | | | |||||||||| ||| | ||| || ||||| ||| ||| |||||||||||
Sbjct 633 TTTCCCGTGAACGAGGAATTCCTGGAAAGTGCAAGTCATAAGCTTGCGCTGATTACGTCC 574
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 573 CTGCCCTTTGTA 562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945415768832
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