Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq136838 318 2e-84 >seq136838 Length=926 Score = 318 bits (352), Expect = 2e-84 Identities = 317/401 (79%), Gaps = 10/401 (2%) Strand=Plus/Minus Query 87 CCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCC 146 |||||||||| ||||||||| | |||||||||| |||||||||||||| |||||||| Sbjct 925 CCTCCGTTACGCTTTGGGAGGAGA-CCGCCCCAGTCAAACTACCCACCAGACACTGTCCG 867 Query 147 CAACCCAGATCATGGGCCAAGGTTAGAT-ATCCACTACGGTCA-GAGTGGTATTTCAACA 204 |||||| ||||| ||||| | |||||| ||| | || | | | |||||||||||| Sbjct 866 CAACCCGGATCACGGGCCCACGTTAGAACATCAA--ACATTAAAGGGTGGTATTTCAAGG 809 Query 205 ACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAA-ACC 263 | |||||||| ||| |||| ||| ||| || ||||||||||||||||||| | Sbjct 808 TTGGCTCCACAAGAACTGGCGTCCTCGCTTCAAAGCCTCCCACCTATCCTACACATCAAG 749 Query 264 GCACCGAATGC-CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGC 321 || | || | || | ||||||||||| ||||| | |||||||||| |||| |||||| Sbjct 748 GCTC--AAGGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGC 691 Query 322 GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGG 381 | | | ||||||| || | | ||||||||| | | || ||| |||||||| | Sbjct 690 GGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTG 631 Query 382 GGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 441 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 630 GCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 571 Query 442 GGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 ||| ||||||||||| ||||||||||||||| ||||||| Sbjct 570 GGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAAT 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699193206144