Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq35556 82.4 1e-13
seq22297 82.4 1e-13
seq109600 77.0 5e-12
seq40732 77.0 5e-12
seq157205 73.4 6e-11
seq16104 73.4 6e-11
>seq35556
Length=5524
Score = 82.4 bits (90), Expect = 1e-13
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| | | |||||| ||||||| | || | ||| ||| | || |
Sbjct 2702 GTACGAGAGGAACCACA-AGTTCAGAC-AATTGGTATATGTGCCTGGTTGAAAGGCCAAT 2645
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||| | ||| |||||| | ||||||||||||||||| ||||||
Sbjct 2644 GGTGCGAAGCTACTACCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCC 2591
>seq22297
Length=8082
Score = 82.4 bits (90), Expect = 1e-13
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| |||||||||| | | |||||| ||||||| | |||| ||| || | || |
Sbjct 4518 GTATGAGAGGAACCACAGG-TTCAGAC-AATTGGTATGTGCGCCTGGTCGAAAGGCCAAT 4461
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| ||||||||||||||| |||||| | ||||||||||||||||| ||||||
Sbjct 4460 GGTGCGAAGCTACCATCTAAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCC 4407
>seq109600
Length=1362
Score = 77.0 bits (84), Expect = 5e-12
Identities = 85/111 (77%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 4 CGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCC 63
||||||||||||| | |||||| ||||||| | || | ||| || | || ||
Sbjct 1 CGAGAGGAACCGCAGG-TTCAGAC-AATTGGTATATGTGCCTGGTCGAAAGGCCAATGGT 58
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||| ||||||||| ||| || | ||||||||||||||||| ||||||
Sbjct 59 GCGAAGTTACCATCTGAGGGACTAAGACTGAACGCCTCTAAGTCTGAATCC 109
>seq40732
Length=4848
Score = 77.0 bits (84), Expect = 5e-12
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||| ||| | || ||| ||||||| | || | ||| ||| | || |
Sbjct 1971 GTACGAGAGGAATCGCAGG-TTAAGAC-AATTGGTATATGTGCCTGGTTGAAAGGCCAAT 1914
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||| ||||||| |||||| | ||||||||||||||| | ||||||
Sbjct 1913 GGTGCGAAGCTGCCATCTGAGGGATTAAGACTGAACGCCTCTAAGCCTGAATCC 1860
>seq157205
Length=733
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||| | ||||||| | || | ||| || | || |
Sbjct 595 GTACGAGAGGAACCGAAGG-TTCATAC-AATTGGTATATGTGCCTGGTCGAAAGGCCAAT 538
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| | ||||||||||||| |||||| | ||||||||||||||||| ||||||
Sbjct 537 GGTGTGAAGCTACCATCTTAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCC 484
>seq16104
Length=10076
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||| || | || | ||| || | || |
Sbjct 3658 GTACGAGAGGAACCGCAGG-TTCAGAC-AATTAGTATATGTGCCTGGTCGAAAGGCCAAT 3715
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| ||||||||| |||||| ||||| | || |||||||||||||| ||||||
Sbjct 3716 GGTGCGAAGCTAACATCTGAGAGATTAAGACTAAACGCCTCTAAGTCTGAATCC 3769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 817705103616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |