Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq215 170 5e-40 >seq215 Length=448669 Score = 170 bits (188), Expect = 5e-40 Identities = 274/389 (70%), Gaps = 11/389 (3%) Strand=Plus/Plus Query 24 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTG 83 |||||||||||||||||| |||||||||||||||| || ||||||| |||| ||| || Sbjct 302058 CTAACTACGTGCCAGCAGTCGCGGTAATACGTAGGTGGCGAGCGTTATCCGGATTTATTG 302117 Query 84 GGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTG 143 |||||| || |||| || ||| || ||| || || |||| | ||| ||| Sbjct 302118 GGCGTATAGTATGCGTAGACGGAATTGCAAGTCAAAGGTTTAATCATGGAGCTCAACTCC 302177 Query 144 GGAATT--GCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 ||| || |||| |||||| || ||| ||| | |||||||| | || Sbjct 302178 ---ATTCCGCCTTTGAGACTGCTTTTCTCGAGATAAGAAGACGTTAGTGGAATTTGATGT 302234 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261 | ||| ||||||||||| || || | ||||||||||| ||||||||||| | Sbjct 302235 GGAGCGGTGAAATGCGTGGAGATATCAAGGAACACCAAGAGCGAAGGCAGCTAACGATTC 302294 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 | |||||| | | ||| || ||| |||||||| || ||||||||||||| ||||| Sbjct 302295 TTTTTCTGACGTTGAGGCATGAGAGCATGGGGAGCCAATCGGATTAGATACCCGAGTAGT 302354 Query 322 CCA-CGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGCTA 380 ||| || |||||||| |||| |||| | ||| || || ||| || ||||| Sbjct 302355 CCATAGCTGTAAACGATGAGTGCTAGATGTT----AATTA-TTGATTAGTATCGAAGCTA 302409 Query 381 ACGCGTGAAGTTGACCGCCTGGGGAATAC 409 |||||| ||| ||||||||||| ||| Sbjct 302410 ACGCGTTAAGCACTCCGCCTGGGGAGTAC 302438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289577238560