Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq215 107 3e-21 >seq215 Length=448669 Score = 107 bits (118), Expect = 3e-21 Identities = 170/248 (69%), Gaps = 22/248 (9%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||| | ||| ||||||| |||| || ||||| || |||| | ||| ||| Sbjct 305124 CTTAACCTTCTAACACTGGGCAGGTATCAGCCCCTATACTGCGCATTACTG-CTTGGCAG 305066 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||| ||||||||| ||||||||||| | || ||||||||||||| |||| || Sbjct 305065 GGACTTGTGTTTTTGTTAAACAGTCGCCTGAATCGATTCTCTGCGACCTCCACGAG---- 305010 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || ||||||||| |||| |||||||| |||||||||| Sbjct 305009 -----------------GGAGGTACCCCTTCTTGCGAACTTACGGGGTAATTTTGCCGAG 304967 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||||| ||| | || |||| | ||||||| |||| ||| ||||| || Sbjct 304966 TTCCTTAAATGTGGTTATCTCGCTTGCCTGAAAATTCTCTTTCTGATCACGTGTGTTCGT 304907 Query 241 TTACGGTA 248 | ||||| Sbjct 304906 TGTCGGTA 304899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694388126845